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cn_combo_scaffold_11968_4

Organism: CN-SCN_Pseudonocardia_51x

partial RP 9 / 55 MC: 1 BSCG 8 / 51 MC: 1 ASCG 4 / 38
Location: 2241..4043

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Candidatus Microthrix parvicella RepID=UPI000360D803 similarity UNIREF
DB: UNIREF100
  • Identity: 73.7
  • Coverage: 536.0
  • Bit_score: 765
  • Evalue 3.00e-218
Transmembrane efflux protein {ECO:0000313|EMBL:CCM62340.1}; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.7
  • Coverage: 536.0
  • Bit_score: 765
  • Evalue 7.20e-218
transmembrane transport protein similarity KEGG
DB: KEGG
  • Identity: 54.1
  • Coverage: 545.0
  • Bit_score: 584
  • Evalue 3.50e-164

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Taxonomy

Candidatus Microthrix parvicella → Candidatus Microthrix → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1803
GTGGAGGGCACATCGTGTCTTCTCGATGTCGAGGAGGGCGATGACAGCTTCCTGACCGCCACACTGCTCGAAGTTACGGACGAAACGCGGGAGATGTCTGTCGGGCCGGAGCGCAGAAGGGACCTGACGATGGCGGACACGGCAGACGCGGTGAGCGCTGCGCCTGGCACGTCGACCAAACCGTCGGTTCGTTGGGTACCGCTGATCGCACTGGGAGTCGCCCAGTTCGTGATGGTGCTCGACCAGTCGGTGATGAATGTGTCGATCAGCACGCTGGTCGCCGAATTCGACACGACGGTGACGACGATCCAAGCAGTCATCACGCTGTACTGCCTGGTCATGGCGATGTTCATGCTGACGGGCGCCAAGGTCGGTGACATCATCGGTCGGCGCCGCGCGTTCGTCGTCGGCCTGATCATCTACGGATGCGGTTCGCTGATGACCGCATTGGCACCGACCGTGGCCGTGCTGACCCTCGGCTGGTCGATCCTCGAAGGAATCGGCGCGTCGCTGGTTCTGCCGGCGCTGGCCGCGCTCATCGCCGGGAACTTCACCGGAGCCGCCCGGAAGGTCGCCTACGCGGTCATCGGCGGCGTCGCCGGGGCCGGCATCGCTGTCGGCCCGATTCTCGGCGGCTGGGCGACGACGGAGCTGACCTGGCGGATCGTGTTCGCCGGCGAGGTCGTGCTGGTCCTGTTCATCCTCGCCGTGACCGGCAAGGTCGCCGATGCCGTGCGCAGTGGACCGAAACCGCGGCTGGACTACCTGGGCGCCGCCATGTCGGCCGTGGGGCTCGGCGTCATCGTGCTCGGTACGTTGCAGTCGAGCACCTGGGGCTGGGTGGTACCGAAGGACTCCCCGATCGCTCCGCTGGGCTTCTCTCTCACCATGTGGATGATCACCGCGGGAGCCGTCCTGCTCTGGGCCTTCACGGTATGGCAGCGCCATCGGGAGAAGACCGGGGCGGACCCGCTCGTGCACCTGAGCCTCGTGCGGATACCGCCCCTGCGCTCGGGCCTGGCCGGGCTGTTCAGCCAGAACCTCATCCTCATGGGCGTCTTCTTCGTGGTGCCGCTGTACCTGCAACTCGTACTCGGCCTGAACGCGCTGCAGACCGGCATCAAGATGCTGCCCATCTCGATCACCATGTTCCTGGCCGCCGCGGCCGGCTCGCGGCTGTCGTCGCGCTTCACCGTGCGCGGGATCGTCCGAACCGGGCTCGCCACCACGGTGGTGGCGATCGTGATCCTGATCGCCACGGTCCAACCGCAACTCCGGGACGCCGGGTTCGCCGTCTCGATGGCGATCCTCGGCGCCGGGATGGGGCTCATCGCGTCCCAACTCGGCAACGTCGTGCAGTCCTCGGTCGACGCCTCCGGGCGCGGCGAGGCCGGCGGCCTGCAGTACACCGGGCAACAGCTCGGCTCCTCCCTCGGCGTCGCACTGATCGGTGCGATCGTGCTCACCGGACTGACCAGCGGGTTCGTCACCACCGTCGAGGCCGATCCACGGATCACCGCCGAGGTCTCCGCACAGGTGGGTGTCGCCGTCGAAAGCGGTATCGACTTCGTGTCGACCGATCAGGTGCAGGCTGCCGCCGAGCAGGCCGGACTCGACCCGGCCGCCACCACGGCGATTGCGGACAACTACAGCAAGGCCCAGCTCCGCTCGCTGAAGGTCGGCTTGCTGGCCGCGGCTCTGCTCGCTCTGCTTGCGCTGATGTCCACCCGGCATCTTCCGCACGACCCACCAACCAGGCCGCGCAGGGACGAGGAGGCAGCGGATCCCCCGTCGTCCACCTGA
PROTEIN sequence
Length: 601
VEGTSCLLDVEEGDDSFLTATLLEVTDETREMSVGPERRRDLTMADTADAVSAAPGTSTKPSVRWVPLIALGVAQFVMVLDQSVMNVSISTLVAEFDTTVTTIQAVITLYCLVMAMFMLTGAKVGDIIGRRRAFVVGLIIYGCGSLMTALAPTVAVLTLGWSILEGIGASLVLPALAALIAGNFTGAARKVAYAVIGGVAGAGIAVGPILGGWATTELTWRIVFAGEVVLVLFILAVTGKVADAVRSGPKPRLDYLGAAMSAVGLGVIVLGTLQSSTWGWVVPKDSPIAPLGFSLTMWMITAGAVLLWAFTVWQRHREKTGADPLVHLSLVRIPPLRSGLAGLFSQNLILMGVFFVVPLYLQLVLGLNALQTGIKMLPISITMFLAAAAGSRLSSRFTVRGIVRTGLATTVVAIVILIATVQPQLRDAGFAVSMAILGAGMGLIASQLGNVVQSSVDASGRGEAGGLQYTGQQLGSSLGVALIGAIVLTGLTSGFVTTVEADPRITAEVSAQVGVAVESGIDFVSTDQVQAAAEQAGLDPAATTAIADNYSKAQLRSLKVGLLAAALLALLALMSTRHLPHDPPTRPRRDEEAADPPSST*