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cn_combo_scaffold_12535_4

Organism: CN-SCN_Pseudonocardia_51x

partial RP 9 / 55 MC: 1 BSCG 8 / 51 MC: 1 ASCG 4 / 38
Location: 1918..2586

Top 3 Functional Annotations

Value Algorithm Source
Channel protein, hemolysin III family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CIY0_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 85.6
  • Coverage: 222.0
  • Bit_score: 402
  • Evalue 3.20e-109
hemolysin III family channel protein similarity KEGG
DB: KEGG
  • Identity: 85.6
  • Coverage: 222.0
  • Bit_score: 402
  • Evalue 9.10e-110
Channel protein, hemolysin III family {ECO:0000313|EMBL:AEA23200.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 85.6
  • Coverage: 222.0
  • Bit_score: 402
  • Evalue 4.50e-109

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 669
ATGGCCCAGCCACCGGTGCCGCCGTCGGTCAAACCACGGATGCGTGGCTGGCTGCACTTCTGGTCGTTCGCGGTGTCCATCCTGGCGGCGGCGGCGTTGATCTCGGTCGCCGCGTCGCTGGTCGGCACGGCTGCCGCACTGGCGACGGGGGTGTACAGCCTCACGATCCTGGGGCTGTTCGGGGTGAGCGCGCTCTACCACCGGCGGACGTGGACGACGGTCCGGTCGCGGATGGTCATGAAGCGGCTCGACCACTCCATGATCTTCCTGTTCATCGCGGGCACGTACACGCCGGTCGCGGTGCTGTCGATGCAGCCGTCGACGGCCCGCTGGGTGCTGTTCACGGTGTGGGGCGGCGCGATCGCAGGCGTCGTGCTGAAGATGGCCTGGCCGGCCGCCCCGTCGTGGCTCGCCGTGCCCATCTACGTGGCGTTGGGCTGGGTCGCCGTCTTCGTGTTCCCCGAGATGCTGCGCACCGGGGGCGTCGCGGCGTTCGTGCTGGTCGTGGCGGGTGGTGCGCTGTACACGGCGGGTGCGGTGTTCTATGCGACGAAGTGGCCGAACCCGTGGCCCGCGACGTTCGGGTACCACGAGTTCTTCCACGCGGCGACTGTGCTGGCCGCCGCGTGCCACTACATCGCGATCTGGCTGGTGCTGTTCGCGGGCTGA
PROTEIN sequence
Length: 223
MAQPPVPPSVKPRMRGWLHFWSFAVSILAAAALISVAASLVGTAAALATGVYSLTILGLFGVSALYHRRTWTTVRSRMVMKRLDHSMIFLFIAGTYTPVAVLSMQPSTARWVLFTVWGGAIAGVVLKMAWPAAPSWLAVPIYVALGWVAVFVFPEMLRTGGVAAFVLVVAGGALYTAGAVFYATKWPNPWPATFGYHEFFHAATVLAAACHYIAIWLVLFAG*