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cn_combo_scaffold_12557_10

Organism: CN-SCN_Pseudonocardia_51x

partial RP 9 / 55 MC: 1 BSCG 8 / 51 MC: 1 ASCG 4 / 38
Location: comp(7764..7910)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L28 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D1K8_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 91.7
  • Coverage: 48.0
  • Bit_score: 98
  • Evalue 2.20e-18
50S ribosomal protein L28 similarity KEGG
DB: KEGG
  • Identity: 91.7
  • Coverage: 48.0
  • Bit_score: 98
  • Evalue 6.10e-19
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivora similarity UNIPROT
DB: UniProtKB
  • Identity: 91.7
  • Coverage: 48.0
  • Bit_score: 98
  • Evalue 3.00e-18

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 147
ATGTCCGTCTCGCACTCGCACCGCCGCACCCACCGCCGCTGGAACCCGAACATCCAGACCGTGCGCACCCGCGACGACGGCGGCAACCGCCGCCGTCAGAACGTGTGCACCTCGTGCCTGAAGGCCGGCAAGGTCGCGCGCGGCTGA
PROTEIN sequence
Length: 49
MSVSHSHRRTHRRWNPNIQTVRTRDDGGNRRRQNVCTSCLKAGKVARG*