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cn_combo_scaffold_12562_5

Organism: CN-SCN_Pseudonocardia_51x

partial RP 9 / 55 MC: 1 BSCG 8 / 51 MC: 1 ASCG 4 / 38
Location: comp(6758..7567)

Top 3 Functional Annotations

Value Algorithm Source
Penicillin-binding protein transpeptidase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CL71_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 59.4
  • Coverage: 278.0
  • Bit_score: 267
  • Evalue 1.50e-68
penicillin-binding protein transpeptidase similarity KEGG
DB: KEGG
  • Identity: 59.0
  • Coverage: 278.0
  • Bit_score: 265
  • Evalue 1.20e-68
Penicillin-binding protein transpeptidase {ECO:0000313|EMBL:AEA25000.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia similarity UNIPROT
DB: UniProtKB
  • Identity: 59.0
  • Coverage: 278.0
  • Bit_score: 265
  • Evalue 6.10e-68

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 810
GTGAGTGCACCTGTCACTGAACGTCAGCACGTCGCGGCGCCGTCGCGGTCGCGGCGGGCCCGGTCGGCGGTGCCGGCCCCGCGGGCGGCGCGTGTCGTCGAGGTCCCGGCGCAGCGGACGCGCTCGGGCTCGACCAGGAACACGTCGAGCACGCGCACGAGCAAGGCCGCGAGCCCACGGTCGGCCGCGCAGCGTGCGTACGCCCGCCGTGACGACCGGTTGCGCCGCATCGTCGGAGGCCGCGTCCAGAAGCAGGCGGCCCCCGCCGGGCGCGCCCAGTTCGTGCTGCTCGTGATGGTGCTGCTGGCCATCGGTCTGGTGGCGACGCTGTGGCTGTCGACCGCGGCCGCCGCCGACTCCTACCGGCTGCAGGACGCCCGCACCGCGACGCGTGACCTCAGCGAGCAGAGCGAGCTGCTGCGCAAGCAGGTCGCGGCGCTCGACGCATCGCCCGCGCTGGCGCAGCGCGCCACCGACCTGGGCATGGTGCCGTCGAAGAACCCGGCTCGGCTCGTCGTCGGTGCCGACGGGGCGGTGACGCTCGTCGGTGAGCCGTCGGCAGCGCAGGCCCCGCCGCCCCCGCCCGCGCCGCCGGCCCCGCCGACTGATCCGAACGCCCAGGCGCAGACCCCGCCGCCCGCCGACGCCGGCGCGGCAGGTGCTCGGACGCCGCCACCCGCCGACGCGGGGGCCCAGAACCCGAGCACCCAGGCCCAGGCGCCGGCCGAACCGCCGGCGGGCACGAACGCGGCGACCGAGGACGCCCAGTCCCAGGCCGACGCAGGGGCCACGCCGGGCGGAGCGGGCTGA
PROTEIN sequence
Length: 270
VSAPVTERQHVAAPSRSRRARSAVPAPRAARVVEVPAQRTRSGSTRNTSSTRTSKAASPRSAAQRAYARRDDRLRRIVGGRVQKQAAPAGRAQFVLLVMVLLAIGLVATLWLSTAAAADSYRLQDARTATRDLSEQSELLRKQVAALDASPALAQRATDLGMVPSKNPARLVVGADGAVTLVGEPSAAQAPPPPPAPPAPPTDPNAQAQTPPPADAGAAGARTPPPADAGAQNPSTQAQAPAEPPAGTNAATEDAQSQADAGATPGGAG*