ggKbase home page

cn_combo_scaffold_12562_7

Organism: CN-SCN_Pseudonocardia_51x

partial RP 9 / 55 MC: 1 BSCG 8 / 51 MC: 1 ASCG 4 / 38
Location: comp(7668..8177)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_0100 similarity UNIPROT
DB: UniProtKB
  • Identity: 93.5
  • Coverage: 169.0
  • Bit_score: 307
  • Evalue 1.20e-80
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CL70_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 93.5
  • Coverage: 169.0
  • Bit_score: 307
  • Evalue 8.20e-81
ribosomal RNA small subunit methyltransferase H similarity KEGG
DB: KEGG
  • Identity: 93.5
  • Coverage: 169.0
  • Bit_score: 307
  • Evalue 2.30e-81

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 510
CCCGAGCTCGCGCGCATCCTGCGCGAGTACGGGGAGGAGCGGTTCGCGGGCCGGATCGCCGCGGCGATCGGCCGGACGCGCGACCACCGGCCGTTCACCCGCAGCGCCGAGCTCGTGGAACTGCTCTACGCCACGGTGCCCGCAGCGTCGCGGCGCACCGGTGGCCACCCCGCCAAGCGCACGTTCCAGGCCCTGCGGATCGAGGTCAACGGGGAGCTCGACGCGCTGCGTGCTGCCGTGCCCGCGGCGCTCGACTCGTTGACCGTCGGTGGGCGGATCGTCGTGCTGTCCTACCACTCGCTCGAGGACCGGCTGGTCAAGCGCGAGCTCGCCGCCCGGTCGGTGTCGACGTCCCCGCAGGACCTCCCCGTCGAGCTCCCCGGGCACGGCCCGGAGCTGCGGCTGCTGGTCCGCGGGTCCCAGCCCGCGTCCGAGGACGAGATCGCGGACAACCCGCGGGCCGCCTCGGTGCGCCTGCGTGCCGCCGAGCGGATCCGGGAAGCGGCATGA
PROTEIN sequence
Length: 170
PELARILREYGEERFAGRIAAAIGRTRDHRPFTRSAELVELLYATVPAASRRTGGHPAKRTFQALRIEVNGELDALRAAVPAALDSLTVGGRIVVLSYHSLEDRLVKRELAARSVSTSPQDLPVELPGHGPELRLLVRGSQPASEDEIADNPRAASVRLRAAERIREAA*