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cn_combo_scaffold_14187_3

Organism: CN-SCN_Pseudonocardia_51x

partial RP 9 / 55 MC: 1 BSCG 8 / 51 MC: 1 ASCG 4 / 38
Location: comp(3001..4011)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LacI family n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S6L6_GEOOG similarity UNIREF
DB: UNIREF100
  • Identity: 66.1
  • Coverage: 327.0
  • Bit_score: 399
  • Evalue 2.40e-108
LacI family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 66.1
  • Coverage: 327.0
  • Bit_score: 399
  • Evalue 6.80e-109
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ADB75390.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophi similarity UNIPROT
DB: UniProtKB
  • Identity: 66.1
  • Coverage: 327.0
  • Bit_score: 399
  • Evalue 3.40e-108

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Taxonomy

Geodermatophilus obscurus → Geodermatophilus → Geodermatophilales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1011
ATGAACCGCCGCCCCACGCTCGAGGACGTCGCCGCGCTCGCGGGCGTCTCGCGGGCGCTGGTGTCGATCGTCATCCGCGACGCACCTGGTGCCGGCGCCGAGACCCGCGCCCGGGTCCTCGCCGCCGCCGACGAGCTCGGCTACCGCCCCGACGCCCGCGCCCGCATGCTCGGCCGCTCGCGCACGCGACTGATCGGCGTCTCGTTCGGTGTCGCGCACGCCTTCCACGGCGACCTCGTCGACGGGCTCTACGTCGCGGCCCGCGACGCCGGCTACGAGCTGGCGCTGTCGGCCACCACCGCGCGCCGCAGCGAGGCCGACGCGCTGGCCGGGCTGCAGCAGGACCGGTGCGAGGGCATGGTGCTGCTCGGCCCGCAGCTGCCCACGGCGCAGCTCGTCGCCGCGGCGCGGCACCTGCCGGTCGTCGTGGTCGCGCGGGCGGTGCGCAGCAAGGCGATCGACGTCGTGCGTACCGACGACGCCGCCGGCCTGCGGCTCACCGTCGACCATCTCGCGGGGCTGGGGCACCGGCGGATCGCGCACGTCGACGGCGGGTCCGCCCCCGGCGCCGCCGATCGTCGCCGCGGCTACGCCGAGGCGATGGCGCGCAACGGACTCGACGCGCACACGTGCGTCGTGCCGGGCGGGCTCACCGAGGACGACGGCGCCACCGCGGCCGACGCCCTGCTGACTTCGCCCACACGGCCGACCGCCGTGGCCGCCTTCAACGACCGCTGCGCCACCGGCCTGCTCGACCGGCTGCGCCGCGCGCACGTCGATGTGCCCGGCGACATGTCGGTGGTGGGTTTCGACGACAGCCGCCTTGCCCGGCTCTCCCACGTCGACCTCACGACGGTCGCCCAGGACACCGACGGTCTCGCGGCGCTCGCCCTCGGCCGGGTGATCGCACGGCTCGACGGCGCGGACGTCGACCGCAGAGAGGTCGTCCTGGCGCCGCGGCTCGTCGTCCGGGGCACAACTGCACAGGTTCAACTGGACAGTCTGGGCTGA
PROTEIN sequence
Length: 337
MNRRPTLEDVAALAGVSRALVSIVIRDAPGAGAETRARVLAAADELGYRPDARARMLGRSRTRLIGVSFGVAHAFHGDLVDGLYVAARDAGYELALSATTARRSEADALAGLQQDRCEGMVLLGPQLPTAQLVAAARHLPVVVVARAVRSKAIDVVRTDDAAGLRLTVDHLAGLGHRRIAHVDGGSAPGAADRRRGYAEAMARNGLDAHTCVVPGGLTEDDGATAADALLTSPTRPTAVAAFNDRCATGLLDRLRRAHVDVPGDMSVVGFDDSRLARLSHVDLTTVAQDTDGLAALALGRVIARLDGADVDRREVVLAPRLVVRGTTAQVQLDSLG*