ggKbase home page

cn_combo_scaffold_18695_7

Organism: CN-SCN_Pseudonocardia_51x

partial RP 9 / 55 MC: 1 BSCG 8 / 51 MC: 1 ASCG 4 / 38
Location: comp(5172..5597)

Top 3 Functional Annotations

Value Algorithm Source
ribulose-bisphosphate carboxylase (EC:4.1.1.39) similarity KEGG
DB: KEGG
  • Identity: 89.3
  • Coverage: 140.0
  • Bit_score: 270
  • Evalue 3.40e-70
Ribulose-bisphosphate carboxylase {ECO:0000313|EMBL:AEA28351.1}; EC=4.1.1.39 {ECO:0000313|EMBL:AEA28351.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseu similarity UNIPROT
DB: UniProtKB
  • Identity: 89.3
  • Coverage: 140.0
  • Bit_score: 270
  • Evalue 1.70e-69
Ribulose-bisphosphate carboxylase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQ78_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 89.3
  • Coverage: 140.0
  • Bit_score: 270
  • Evalue 1.20e-69

Lists

This feature is not on any list.

Notes

Rubisco small subunit. Rose Kantor (4/23/14)

Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 426
ATGCGGATCACGCAGGGAACGTTCTCCTATCTCCCCGACTTCACCGACGAGGAGATCACCGCCCAGATCAACTACGCGCTGGGCAACGACTGGCCGTTGTCGGTCGAGTTCACCGACGACCCACACCCCCGCAACACCTTCTGGGAGATGTGGGGCCTGCCGATGTTCGACCTCAAGGACCCGGCCGGCGTCCTGATGGAGGTCAACGCCTGCCGCACGGCCAACCCGAACGCCTACATCCGGCTCAACGCCTACGACGCCAGCCTGGGCCGTCAGACCACGGCGCTGTCGTTCATCGTGCAGCGCCCGGCCGACGAGCCCGGCTTCCACGTCAACCGCACCGAGGTCAAGGGCCGCGCCATCCAGTACACGACACACTCCTACGCCACCGAGCGTCCCGTCGGCGACCGCTACAACCGGGACTGA
PROTEIN sequence
Length: 142
MRITQGTFSYLPDFTDEEITAQINYALGNDWPLSVEFTDDPHPRNTFWEMWGLPMFDLKDPAGVLMEVNACRTANPNAYIRLNAYDASLGRQTTALSFIVQRPADEPGFHVNRTEVKGRAIQYTTHSYATERPVGDRYNRD*