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A1-18-all-fractions_k255_3208672

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A1-18-all-fractions_k255_3208672_1
unknown

Not on your lists

1..258
DNA (258bp) protein (86aa)

This feature has no annotations

A1-18-all-fractions_k255_3208672_2
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

452..904
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GBG5_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN96041.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
A1-18-all-fractions_k255_3208672_3
Treponema socranskii, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(956..1519)
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Ponticaulis koreensis RepID=UPI0003B3AF16
Uncharacterized protein {ECO:0000313|EMBL:EPF25031.1}; TaxID=1125701 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema socranskii subsp. paredis ATCC 35535.;"
hypothetical protein
A1-18-all-fractions_k255_3208672_4
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1616..2365
DNA (750bp) protein (250aa)
Glutathione S-transferase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RAT2_PHEZH
glutathione S-transferase
Glutathione S-transferase {ECO:0000313|EMBL:ACG79680.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
A1-18-all-fractions_k255_3208672_5
Rubellimicrobium mesophilum, Rubellimicrobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2362..2865)
DNA (504bp) protein (168aa)
Putative response regulator (CheY-like receiver domain) n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AWB9_AZOBR
Two-component response regulator {ECO:0000313|EMBL:EYD74340.1}; TaxID=442562 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubellimicrobium.;" source="Rubellimicrobium mesophilum DSM 19309.;"
putative response regulator (CheY-like receiver domain)
A1-18-all-fractions_k255_3208672_6
Sphingobium sp. ba1, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3058..3786)
DNA (729bp) protein (243aa)
Hydrolase n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0GZE3_9SPHN
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:KFL48847.1}; TaxID=1522072 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. ba1.;"
cell wall hydrolase SleB
A1-18-all-fractions_k255_3208672_7
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4254..4661
DNA (408bp) protein (136aa)
ubiquinol-cytochrome C reductase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002489780
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAO40651.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
A1-18-all-fractions_k255_3208672_8
unknown

Not on your lists

comp(4735..4980)
DNA (246bp) protein (82aa)

This feature has no annotations

A1-18-all-fractions_k255_3208672_9
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5179..7008)
DNA (1830bp) protein (610aa)
GTP-binding protein TypA/BipA n=2 Tax=Bacteria RepID=M2TDB0_9PROT
GTP-binding protein TypA/BipA {ECO:0000313|EMBL:AKH42935.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
GTP-binding protein TypA
A1-18-all-fractions_k255_3208672_10
Paracoccus sp. 5503, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7137..7361
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8VV98_9SPHN
Plasmid stabilization protein {ECO:0000313|EMBL:KGJ23072.1}; TaxID=1525717 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 5503.;"
Transcriptional regulator
A1-18-all-fractions_k255_3208672_11
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(7368..7772)
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Actinomadura atramentaria RepID=UPI000360CCBD
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ACZ39561.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
A1-18-all-fractions_k255_3208672_12
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7874..9052
DNA (1179bp) protein (393aa)
Major facilitator superfamily MFS_1 n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IES7_XANP2
major facilitator transporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABS66520.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
A1-18-all-fractions_k255_3208672_13
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

comp(9042..11120)
DNA (2079bp) protein (693aa)
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Sphingopyxis baekryungensis RepID=UPI0003B4B341
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:KIY11958.1}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
3-hydroxyacyl-CoA dehydrogenase
A1-18-all-fractions_k255_3208672_14
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11201..12655
DNA (1455bp) protein (485aa)
cyclohexanone 1,2-monooxygenase, fad-binding (EC:1.14.13.22)
FAD-containing monooxygenase EthA n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=UPI000371A42A
Monooxygenase, flavin-binding family {ECO:0000313|EMBL:EYF08247.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
A1-18-all-fractions_k255_3208672_15
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12664..13920
DNA (1257bp) protein (419aa)
Candidate b-glycosidase, Glycoside Hydrolase Family 1 n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y625_RAMTT
B-glycosidase {ECO:0000313|EMBL:KFG66792.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
b-glycosidase
A1-18-all-fractions_k255_3208672_16
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13926..14372
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0K3D6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB31089.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;"
hypothetical protein
A1-18-all-fractions_k255_3208672_17
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14400..14723)
DNA (324bp) protein (108aa)
Ethyl tert-butyl ether degradation EthD n=3 Tax=Acidiphilium RepID=A5FUX3_ACICJ
ethyl tert-butyl ether degradation EthD
Ethyl tert-butyl ether degradation EthD {ECO:0000313|EMBL:EGO96102.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
A1-18-all-fractions_k255_3208672_18
unknown

Not on your lists

comp(14852..15004)
DNA (153bp) protein (51aa)

This feature has no annotations

A1-18-all-fractions_k255_3208672_19
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15120..15392)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G3R2_NOVAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD27511.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
A1-18-all-fractions_k255_3208672_20
unknown

Not on your lists

comp(15349..15498)
DNA (150bp) protein (50aa)

This feature has no annotations

A1-18-all-fractions_k255_3208672_21
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15781..15987
DNA (207bp) protein (69aa)
cold-shock protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00036B7479
Putative cold shock protein {ECO:0000313|EMBL:GAO40972.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
cold-shock DNA-binding domain-containing protein
A1-18-all-fractions_k255_3208672_22
R_Erythrobacter_63_10, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16220..17377
DNA (1158bp) protein (386aa)
acyl-CoA dehydrogenase n=1 Tax=Sphingopyxis baekryungensis RepID=UPI0003B52952
acyl-CoA dehydrogenase-like protein
Tax=RIFCSPHIGHO2_12_FULL_Erythrobacter_63_10_curated
A1-18-all-fractions_k255_3208672_23
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17380..18510
DNA (1131bp) protein (377aa)
Putative acyl-CoA dehydrogenase n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PAK0_9SPHN
Acyl-CoA dehydrogenase family protein {ECO:0000313|EMBL:GAO54757.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
acyl-CoA dehydrogenase
A1-18-all-fractions_k255_3208672_24
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18507..18659)
DNA (153bp) protein (51aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000362B607
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
A1-18-all-fractions_k255_3208672_25
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18800..19039
DNA (240bp) protein (80aa)
Phosphoribosylformylglycinamidine synthase subunit PurS {ECO:0000256|HAMAP-Rule:MF_01926}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_01926};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_01926};; Formylglycinamide ribonucleotide amidotransferase subunit III {ECO:0000256|HAMAP-Rule:MF_01926}; Phosphoribosylformylglycinamidine synthase subunit III {ECO:0000256|HAMAP-Rule:MF_01926}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
Phosphoribosylformylglycinamidine synthase PurS component n=4 Tax=Sphingobium RepID=D4Z120_SPHJU
phosphoribosylformylglycinamidine synthase purS
A1-18-all-fractions_k255_3208672_26
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19036..19704
DNA (669bp) protein (223aa)
Phosphoribosylformylglycinamidine synthase subunit PurQ {ECO:0000256|HAMAP-Rule:MF_00421, ECO:0000256|SAAS:SAAS00064601}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00421};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00421, ECO:0000256|SAAS:SAAS00064588};; Formylglycinamide ribonucleotide amidotransferase subunit I {ECO:0000256|HAMAP-Rule:MF_00421}; Glutaminase PurQ {ECO:0000256|HAMAP-Rule:MF_00421}; Phosphoribosylformylglycinamidine synthase subunit I {ECO:0000256|HAMAP-Rule:MF_00421}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
Phosphoribosylformylglycinamidine synthase 1 n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V3C7_SPHWW
phosphoribosylformylglycinamidine synthase I
A1-18-all-fractions_k255_3208672_27
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19701..20447)
DNA (747bp) protein (249aa)
membrane protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC137
Uncharacterized protein {ECO:0000313|EMBL:GAO39429.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
hypothetical protein
A1-18-all-fractions_k255_3208672_28
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20763..21224
DNA (462bp) protein (154aa)
Prokaryotic transcription elongation factor, GreA/GreB, C-terminal domain protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WXK4_9SPHN
DNA, contig: SP654 {ECO:0000313|EMBL:GAN15253.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
GreA/GreB family elongation factor
A1-18-all-fractions_k255_3208672_29
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21328..21999
DNA (672bp) protein (224aa)
spermidine synthase n=1 Tax=Sphingobium sp. YL23 RepID=UPI0003B5C508
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH48874.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
A1-18-all-fractions_k255_3208672_30
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22030..23892)
DNA (1863bp) protein (621aa)
ABC transporter related n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GNF1_SPHAL
ABC transporter {ECO:0000313|EMBL:KGB52485.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
ABC transporter
Displaying items 1-30 of 33 in total

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