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H1-18-all-fractions_k255_200060_2

Organism: H1-18-all-fractions_conc_55

near complete RP 45 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: comp(423..1580)

Top 3 Functional Annotations

Value Algorithm Source
Putative response regulator receiver protein n=1 Tax=Variovorax paradoxus B4 RepID=T1X851_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 54.3
  • Coverage: 383.0
  • Bit_score: 419
  • Evalue 2.60e-114
Type II/IV secretion system ATPase TadZ/CpaE similarity KEGG
DB: KEGG
  • Identity: 64.8
  • Coverage: 383.0
  • Bit_score: 511
  • Evalue 1.40e-142
Type II/IV secretion system ATPase TadZ/CpaE {ECO:0000313|EMBL:AIY42967.1}; TaxID=279058 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas arenae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.8
  • Coverage: 383.0
  • Bit_score: 511
  • Evalue 7.00e-142

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Taxonomy

Collimonas arenae → Collimonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1158
ATGAAAATCGCCGTCATTTCCCCCAGCATGAACCATCTGCACGAGATGGGAAAACTCCTCCTGAGCCTGTCGCACCTGCCCGTGCTGATCGAAGGGGGAAAGAGCAAGATGCGCGAGGCGGCCGAGCACGAGGCGCCCGACATGATCCTGGTCGAGGGCATCTGCTGCGACCCGGCCGAACTGGCACAGGTGGAATACGTCACCACCCACCACCCCCACATCGCGGTGGTGCTGCTGTGCGCCACCACCTCGCCCGACTTCCTGATCAATTCGATGCGGGCGGGCGTGCGCGAGGTGCTGCCCTCGCCCGCCACGCCGGCGGCGCTGGAGGCGACCATCAAGCGGGTCGCCAGCAAACTGCAGGGCAGCGCGGCGCGGCCCAGCGGCAAGGTGCTCTCCTTCATATCCTGCAAGGGCGGCAATGGCGCGACCTTCCTTGCCACCAACCTGGCGCTGGAACTGGCGCAGTCGAAGTCGGTGCTGCTGATCGACCTGAACTTGCAGTTCGGCGACGCCCTTACTTTTGTGCACGAGGCCCGTCCAGCGTCCACACTGGCCGATGTGGCGCGCGAGATCGGCCGGCTCGACGCCTCCTTCCTCGCCGCCAGCACCGTCAAGGTGGCGCCCAATTTCAGCCTGCTCGCTGCACCCGACGATCCATCCGAAGCGGTGGAAATCACGCCCGAGCACATCGAAGCCGTGCTGGCCCTGGCCGTCACCCAGCACGACTTCGTGCTGCTCGACCTGGGCCGCCCCATCAATACCCACACGGTCAAGGCGCTCGACCGCAGCCACACGGTGTTCAACGTCCTGCAGGCCAACCTGCCGTCGCTGCGCAACACCAAGAAGATGCTTGCCATCTTCAAGTCGCTGGGCTATCCGCCGGAAAAAATCGCCTTGGTGGTGAACCGCTTTGAAAAGGGCGGCGACATCGGACTGGCCGACATCCAGCGTGCGCTGGGTCGCCACACGGTGCACACGGTGGCCAATTCCTACAAGCGGGTGGCGGCCTCGATCAACCATGGCGAACCCTTGATGAGTTCTTCGCCATCGAACCCGGTGGCGCGCAGCCTGGCCGAATTTGCCGAGACCCTGAATCCGAAGCCGGAAGACACCCGCGGCCTGCTTGACCGCATCCTGCGTCGCGCTTCGGCCTGA
PROTEIN sequence
Length: 386
MKIAVISPSMNHLHEMGKLLLSLSHLPVLIEGGKSKMREAAEHEAPDMILVEGICCDPAELAQVEYVTTHHPHIAVVLLCATTSPDFLINSMRAGVREVLPSPATPAALEATIKRVASKLQGSAARPSGKVLSFISCKGGNGATFLATNLALELAQSKSVLLIDLNLQFGDALTFVHEARPASTLADVAREIGRLDASFLAASTVKVAPNFSLLAAPDDPSEAVEITPEHIEAVLALAVTQHDFVLLDLGRPINTHTVKALDRSHTVFNVLQANLPSLRNTKKMLAIFKSLGYPPEKIALVVNRFEKGGDIGLADIQRALGRHTVHTVANSYKRVAASINHGEPLMSSSPSNPVARSLAEFAETLNPKPEDTRGLLDRILRRASA*