ggKbase home page

H1-18-all-fractions_k255_6411489_87

Organism: H1-18-all-fractions_conc_96

near complete RP 31 / 55 BSCG 49 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: 101034..101681

Top 3 Functional Annotations

Value Algorithm Source
transmembrane anti-sigma factor n=1 Tax=Saccharopolyspora spinosa RepID=UPI0002379271 similarity UNIREF
DB: UNIREF100
  • Identity: 47.0
  • Coverage: 234.0
  • Bit_score: 188
  • Evalue 5.40e-45
transmembrane anti-sigma factor similarity KEGG
DB: KEGG
  • Identity: 42.4
  • Coverage: 236.0
  • Bit_score: 169
  • Evalue 5.60e-40
Putative transmembrane anti-sigma factor {ECO:0000313|EMBL:ACU39188.1}; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.4
  • Coverage: 236.0
  • Bit_score: 169
  • Evalue 2.80e-39

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Actinosynnema mirum → Actinosynnema → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 648
ATGGCACGTCATGACCGCGAAGTCCTCGGCGTCTACTCGCTGGGTGCGCTGGACGACCGGCAGTCGATGCTGGTCGAGGAGCACCTGACGGAATGCGCGGGCTGCCGCGCCGAGCTGGAACGGCTGGTCGAACTCCGCCCGCTGCTAGACCTGCTACCACCGGAGGCATTCGCCGACAGTCCACAATGGACTCGCTGGCCGAGGGGCGGTTGGGCACGGGTTGGCCTGGTCCTCGCCGTGGCCGCGGTGCTTGCGGCGGCGGTGGCCGGCGGAGTGCTGATCGGCCGCGGCGGCGAGGAGCAACCCGCGCTGCCCCAACAGGCTCCAGGACTCGCGCCGCCCCAGGGCACCCGGTTCGCCTCGGGCACCGATCCCACCGGGGCCTCGCTGAGCGTGCGGCTCGAGCCGGCCGGCGGTTGGGTGCGCGTCAGCGCGGTCAGTTCAGGAATCCGGGCCGGCGAGCGCTGCCGGCTGGTGGTGGTCTCCCGCACCGGAGAGCGCCAGCTCTCCGGGAGTTGGCTGGTCTCGGCAATCAGCGAGACGTCCGGTACCAGCGTCGACGGCGCCGCTCTGGTCGCGCCGGAGGACGTGGTCGCCGTGCGGATCGAGAACTTCGACGGCCGCGTACTGGTGTCCGTCTCGCTCTGA
PROTEIN sequence
Length: 216
MARHDREVLGVYSLGALDDRQSMLVEEHLTECAGCRAELERLVELRPLLDLLPPEAFADSPQWTRWPRGGWARVGLVLAVAAVLAAAVAGGVLIGRGGEEQPALPQQAPGLAPPQGTRFASGTDPTGASLSVRLEPAGGWVRVSAVSSGIRAGERCRLVVVSRTGERQLSGSWLVSAISETSGTSVDGAALVAPEDVVAVRIENFDGRVLVSVSL*