ggKbase home page

H1-18-all-fractions_k255_6411489

Search features with annotation key words

Displaying items 61-90 of 108 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H1-18-all-fractions_k255_6411489_61
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

69489..71168
DNA (1680bp) protein (560aa)
Beta-xylanase {ECO:0000256|RuleBase:RU361174}; EC=3.2.1.8 {ECO:0000256|RuleBase:RU361174};; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
hypothetical protein n=1 Tax=Nonomuraea coxensis RepID=UPI00037AA628
beta-1 4-xylanase-like protein
H1-18-all-fractions_k255_6411489_62
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

71405..72979
DNA (1575bp) protein (525aa)
hypothetical protein n=1 Tax=Catelliglobosispora koreensis RepID=UPI00035E9E91
Myeloperoxidase, thyroid peroxidase, cyclooxygenase catalytic domain {ECO:0000313|EMBL:CEL12764.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
hypothetical protein
H1-18-all-fractions_k255_6411489_63
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

73123..73704
DNA (582bp) protein (194aa)
Transcriptional regulator, padr-like family protein n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FBN7_VERMA
PadR-like family transcriptional regulator
Transcriptional regulator, padr-like family protein {ECO:0000313|EMBL:AEB43499.1}; TaxID=263358 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
H1-18-all-fractions_k255_6411489_64
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

73701..74486
DNA (786bp) protein (262aa)
Abc transporter related protein n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FBN6_VERMA
Micromonospora carbonacea strain JXNU-1 contig1, whole genome shotgun sequence {ECO:0000313|EMBL:KIR66836.1}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
ABC transporter
H1-18-all-fractions_k255_6411489_65
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

74483..77185
DNA (2703bp) protein (901aa)
Putative uncharacterized protein n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RD62_9ACTO
Putative uncharacterized protein {ECO:0000313|EMBL:EEP74014.1}; TaxID=219305 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
hypothetical protein
H1-18-all-fractions_k255_6411489_66
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

77262..78191
DNA (930bp) protein (310aa)
MCP methyltransferase, CheR-type n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NNU9_ROSCS
chemotaxis protein CheR
MCP methyltransferase, CheR-type {ECO:0000313|EMBL:ABU59243.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
H1-18-all-fractions_k255_6411489_67
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

78275..79975
DNA (1701bp) protein (567aa)
hypothetical protein n=1 Tax=Amycolatopsis balhimycina RepID=UPI00037AD2C1
Phosphoesterase {ECO:0000313|EMBL:KJK51687.1}; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
phosphoesterase
H1-18-all-fractions_k255_6411489_68
Amycolatopsis sp. MJM2582, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

80000..81271
DNA (1272bp) protein (424aa)
cytochrome P450 n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI0003666532
Cytochrome P450 {ECO:0000313|EMBL:KFZ78799.1}; TaxID=1427749 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis sp. MJM2582.;"
cytochrome P450
H1-18-all-fractions_k255_6411489_69
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(81337..82797)
DNA (1461bp) protein (487aa)
Uncharacterized protein n=3 Tax=Amycolatopsis mediterranei RepID=G0FSJ4_AMYMS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEK42082.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
H1-18-all-fractions_k255_6411489_70
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(82947..83285)
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Streptomyces scabrisporus RepID=UPI00037A4E4C
Uncharacterized protein {ECO:0000313|EMBL:EWC63642.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
hypothetical protein
H1-18-all-fractions_k255_6411489_71
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(83322..84575)
DNA (1254bp) protein (418aa)
RNA polymerase sigma factor n=3 Tax=Amycolatopsis mediterranei RepID=D8I743_AMYMU
RNA polymerase sigma factor {ECO:0000313|EMBL:KDN17172.1}; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
RNA polymerase sigma factor
H1-18-all-fractions_k255_6411489_72
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

84810..86402
DNA (1593bp) protein (531aa)
Tryptophan halogenase n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0K1W3_SACES
prnA; Tryptophan halogenase
Tryptophan halogenase {ECO:0000313|EMBL:CCH30548.1}; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
H1-18-all-fractions_k255_6411489_73

Not on your lists

86406..87686
DNA (1281bp) protein (427aa)
hypothetical protein n=1 Tax=Longispora albida RepID=UPI00035D4C98
Na+/H+ antiporter {ECO:0000313|EMBL:AGS49521.1}; TaxID=1366614 species="Bacteria; environmental samples.;" source="uncultured bacterium esnapd7.;"
sodium/hydrogen exchanger
H1-18-all-fractions_k255_6411489_74
Amycolatopsis lurida, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(87727..88428)
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Amycolatopsis alba RepID=UPI00037BE392
cyclic nucleotide-binding protein
Cyclic nucleotide-binding protein {ECO:0000313|EMBL:AJK55725.1}; TaxID=1460371 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis lurida NRRL 2430.;"
H1-18-all-fractions_k255_6411489_75
Amycolatopsis lurida, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

88542..88931
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Amycolatopsis alba RepID=UPI0003743661
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJK55724.1}; TaxID=1460371 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis lurida NRRL 2430.;"
H1-18-all-fractions_k255_6411489_76
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

88943..90127
DNA (1185bp) protein (395aa)
ROK family transcriptional regulator n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002628146
ROK family transcriptional regulator
ROK family transcriptional regulator {ECO:0000313|EMBL:AIJ22865.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
H1-18-all-fractions_k255_6411489_77
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

90270..91496
DNA (1227bp) protein (409aa)
hypothetical protein n=1 Tax=Actinoalloteichus spitiensis RepID=UPI000379E637
Xylose-responsive transcription regulator, ROK family {ECO:0000313|EMBL:CEL16674.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
transcriptional regulator, Rok family protein
H1-18-all-fractions_k255_6411489_78
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

91493..93010
DNA (1518bp) protein (506aa)
sugar ABC transporter ATPase n=1 Tax=Amycolatopsis nigrescens RepID=UPI00037F8303
rbsA; monosaccharide ABC transporter ATP-binding protein
Monosaccharide ABC transporter ATP-binding protein {ECO:0000313|EMBL:AIJ22868.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
H1-18-all-fractions_k255_6411489_79
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

93007..94011
DNA (1005bp) protein (335aa)
Permease component of ribose/xylose/arabinose/galactoside ABC-type transporter n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X1J8_9PSEU
Permease component of ribose/xylose/arabinose/galactoside ABC-type transporter {ECO:0000313|EMBL:EHR49789.1}; Flags: Precursor;; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
monosaccharide ABC transporter membrane protein
H1-18-all-fractions_k255_6411489_80
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

94022..95071
DNA (1050bp) protein (350aa)
sugar ABC transporter substrate-binding protein n=1 Tax=Amycolatopsis balhimycina RepID=UPI0003811E79
sugar ABC transporter periplasmic protein
Sugar ABC transporter periplasmic protein {ECO:0000313|EMBL:AEK42535.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
H1-18-all-fractions_k255_6411489_81
Saccharopolyspora rectivirgula, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

95081..96238
DNA (1158bp) protein (386aa)
Xylose isomerase {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609}; EC=5.3.1.5 {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609};; TaxID=28042 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora rectivirgula.;"
xylose isomerase (EC:5.3.1.5)
xylose isomerase n=1 Tax=Streptomyces scabrisporus RepID=UPI00037FCB3F
H1-18-all-fractions_k255_6411489_82
Saccharomonospora viridis, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

96252..97256
DNA (1005bp) protein (335aa)
Sugar phosphate isomerase/epimerase n=1 Tax=Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101) RepID=C7MZ50_SACVD
sugar phosphate isomerase/epimerase
Sugar phosphate isomerase/epimerase {ECO:0000313|EMBL:ACU96171.1}; TaxID=471857 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 /; NBRC 12207 / P101).;"
H1-18-all-fractions_k255_6411489_83
unknown

Not on your lists

comp(97323..97703)
DNA (381bp) protein (127aa)

This feature has no annotations

H1-18-all-fractions_k255_6411489_84
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

97903..98676
DNA (774bp) protein (258aa)
cyclase n=1 Tax=Amycolatopsis methanolica RepID=UPI000360564F
cyclase
Cyclase {ECO:0000313|EMBL:AIJ22444.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
H1-18-all-fractions_k255_6411489_85
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

98711..100339
DNA (1629bp) protein (543aa)
Acetolactate synthase I/II/III large subunit n=1 Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1HPW1_9PSEU
Acetolactate synthase I/II/III large subunit {ECO:0000313|EMBL:EOD65540.1}; TaxID=1292037 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM 44592.;"
ilvB; acetolactate synthase I/II/III large subunit
H1-18-all-fractions_k255_6411489_86
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(100473..100655)
DNA (183bp) protein (61aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI000381C045
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
ECF subfamily RNA polymerase sigma-24 subunit
H1-18-all-fractions_k255_6411489_87
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

101034..101681
DNA (648bp) protein (216aa)
transmembrane anti-sigma factor n=1 Tax=Saccharopolyspora spinosa RepID=UPI0002379271
transmembrane anti-sigma factor
Putative transmembrane anti-sigma factor {ECO:0000313|EMBL:ACU39188.1}; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;"
H1-18-all-fractions_k255_6411489_88
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

102190..106101
DNA (3912bp) protein (1304aa)
Glycosyl hydrolase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q022A7_SOLUE
glycosyl hydrolase
Glycosyl hydrolase {ECO:0000313|EMBL:ABJ84196.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
H1-18-all-fractions_k255_6411489_89
unknown

Not on your lists

comp(106378..106587)
DNA (210bp) protein (70aa)

This feature has no annotations

H1-18-all-fractions_k255_6411489_90
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(106655..108427)
DNA (1773bp) protein (591aa)
Chitinase {ECO:0000313|EMBL:CEL21835.1}; EC=3.2.1.14 {ECO:0000313|EMBL:CEL21835.1};; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
chi01; Exochitinase 1 (EC:3.2.1.14)
Chitinase n=1 Tax=Amycolatopsis azurea DSM 43854 RepID=M2PU94_9PSEU
Displaying items 61-90 of 108 in total

View Taxonomy