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H1-18-all-fractions_k255_4195933_23

Organism: H1-18-all-fractions_conc_96

near complete RP 31 / 55 BSCG 49 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(22517..24445)

Top 3 Functional Annotations

Value Algorithm Source
succinate dehydrogenase n=1 Tax=Amycolatopsis nigrescens RepID=UPI000374D0C2 similarity UNIREF
DB: UNIREF100
  • Identity: 84.9
  • Coverage: 642.0
  • Bit_score: 1116
  • Evalue 0.0
Succinate dehydrogenase flavoprotein subunit {ECO:0000313|EMBL:AIJ25104.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.6
  • Coverage: 642.0
  • Bit_score: 1112
  • Evalue 0.0
sdhA; succinate dehydrogenase flavoprotein subunit similarity KEGG
DB: KEGG
  • Identity: 84.6
  • Coverage: 642.0
  • Bit_score: 1112
  • Evalue 0.0

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Taxonomy

Amycolatopsis methanolica → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1929
ATGATTCAGGTAGAGCGGCACGCCTACGACGTCGTGGTGATCGGTGCCGGCGGTGCGGGCCTGCGTGCGGTCATCGAGGCACGGCAGGCCGGACTGTCCGTCGCGGTGGTGTGCAAGTCGTTGTTCGGCAAGGCACACACCGTGATGGCCGAGGGCGGCTGCGCGGCCGCGATGGGCAACGTCAACTCCAACGACAACTGGCAGGTGCACTTCCGCGACACGATGCGCGGCGGCAAGTTCCTGAACAACTGGCGGATGGCCGAGCTGCACGCCAAGGAGGCACCGGAGCGGGTCTGGGAACTGGAGACCTACGGCGCGCTGTTCGACCGCACGAAGGACGGCCGGATCAGCCAGCGCAACTTCGGCGGGCACACCTACCCTCGGCTGGCGCACGTCGGCGACCGGACCGGCCTTGAGCTGATCCGAACCATGCAGCAGAAGATCGTTTCCTTGCAGCAGGAGGATTTCCGCGAGCACGGCGACTACGAGGCGAAGATCAAGGTGTTCGCCGAGTGCACGATCACCGAACTGCTCATGGACCGGACCGGCGAGCAGAACCGCATCGCCGGGGCGTTCGGCTACTGGCGCGAGTCCGGCCGGTTCGTGCTGTTCCAGAGCCCGGCCGTGGTGATGGCCACCGGTGGGATCGGCAAGTCGTTCAAGGTCACCTCGAACTCCTGGGAGTACACAGGGGACGGTCATGCGCTGGCGCTGCGGGCCGGCGCGACGCTGATCAACATGGAGTTCGTGCAGTTCCACCCGACCGGCATGGTCTGGCCGCCGAGCGTGAAGGGCATCCTGGTCACCGAAGGGGTGCGCGGCGACGGGGGAGTGCTGAAGAACTCGGACGACAAGCGGTTCATGTTCGAGTACATCCCGCAGGTGTTCAAGGGGCAGTACGCGGAGGCGCCGGAGGAGGCGGACCGCTGGTACACCGACGCGGACGCCAACCGGCGCACCCCGGACCTGCTTCCTCGCGACGAGGTGGCGCGGGCGATCAACTCCGAGGTCAAGGCCGGGCGCGGTTCGCCGCACGGCGGCGTGTTCCTGGACATCGCGAGCCGGCTGCCGGCCGAGGAGATCCGCCGCCGGCTGCCCTCGATGTATCACCAGTTCAAGGAACTGGCCGATGTGGACATCACCAAGGAGCCGATGGAGGTCGGGCCGACCTGCCACTACGTGATGGGTGGCATCGAGGTCGACCCGGACACCGGCTCCTCGGTGGTGCCGGGCCTCTTCGCCGCGGGCGAGTGCTCGGGCGGGATGCACGGCTCGAACCGGCTCGGCGGCAACTCGCTGTCCGACCTGATCGTCTTCGGCCGGCGCGCCGGGATGGGCGCGGCGTCCTACGTGCAGTCGCTGGCCACCCGGCCCACGATCAGCGAGTCCGCAGTGGACCTCGCGGCCAAACTTGCGGTCGCGCCGTTCGACCCGCCGGCCGACGAGTCGGCTCCGGAGAACCCGTACACCCTGCACAGCGAGCTTCAGCAGTCGATGAACGACCTGGTCGGCATCATCCGCAGGGCGGACGAGATCGAACTGGCGCTGAAGAAGCTGAGCGAGCTCAAGCAGCGGATCCGCAACGTGATGGTGGAGGGCCACCGCCAGTTCAACCCTGGCTGGCACCTGGCCATCGACCTGCGCAACATGCTGATGGTGAGTGAATGCGTGGCCAAGGCCGCGCTCACCCGCACCGAGAGCCGCGGCGGACACACCAGGGACGACTACCCGGAGATGGATCCCGAGTGGCGCAACAAGTTGCTGGTCTGCCGGCTCGGCGAGGACGACCCGGTGGTACCCGGCATCGCGGTCACCGAGCAGGAGCAGCAGCCGATGCGGCCGGATCTGCTCGAGCAGTTCGAGCGGTCCGAGCTGGCGAAGTACTACACCGAGGGCGAGTTGGCCGGCTACCCGGGAGAGAAGAGCTGA
PROTEIN sequence
Length: 643
MIQVERHAYDVVVIGAGGAGLRAVIEARQAGLSVAVVCKSLFGKAHTVMAEGGCAAAMGNVNSNDNWQVHFRDTMRGGKFLNNWRMAELHAKEAPERVWELETYGALFDRTKDGRISQRNFGGHTYPRLAHVGDRTGLELIRTMQQKIVSLQQEDFREHGDYEAKIKVFAECTITELLMDRTGEQNRIAGAFGYWRESGRFVLFQSPAVVMATGGIGKSFKVTSNSWEYTGDGHALALRAGATLINMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSDDKRFMFEYIPQVFKGQYAEAPEEADRWYTDADANRRTPDLLPRDEVARAINSEVKAGRGSPHGGVFLDIASRLPAEEIRRRLPSMYHQFKELADVDITKEPMEVGPTCHYVMGGIEVDPDTGSSVVPGLFAAGECSGGMHGSNRLGGNSLSDLIVFGRRAGMGAASYVQSLATRPTISESAVDLAAKLAVAPFDPPADESAPENPYTLHSELQQSMNDLVGIIRRADEIELALKKLSELKQRIRNVMVEGHRQFNPGWHLAIDLRNMLMVSECVAKAALTRTESRGGHTRDDYPEMDPEWRNKLLVCRLGEDDPVVPGIAVTEQEQQPMRPDLLEQFERSELAKYYTEGELAGYPGEKS*