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H1-18-all-fractions_k255_4195933

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H1-18-all-fractions_k255_4195933_1
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..834)
DNA (834bp) protein (278aa)
nrdJ; Vitamin B12-dependent ribonucleotide reductase (EC:1.17.4.1)
Vitamin B12-dependent ribonucleotide reductase {ECO:0000313|EMBL:CCH29014.1}; EC=1.17.4.1 {ECO:0000313|EMBL:CCH29014.1};; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
vitamin B12-dependent ribonucleotide reductase n=1 Tax=Actinokineospora enzanensis RepID=UPI00037EEBC6
H1-18-all-fractions_k255_4195933_2
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(987..1457)
DNA (471bp) protein (157aa)
NrdR family transcriptional regulator n=1 Tax=Actinokineospora enzanensis RepID=UPI00036FB774
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
nrdR; Transcriptional regulator
H1-18-all-fractions_k255_4195933_3
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1969..2448)
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI000363DCAB
Uncharacterized protein {ECO:0000313|EMBL:EWC58274.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
membrane protein
H1-18-all-fractions_k255_4195933_4
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2663..3415
DNA (753bp) protein (251aa)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008101}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008054};; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
lexA; LexA repressor (EC:3.4.21.88)
umuDC operon protein-like protein n=1 Tax=Actinokineospora enzanensis RepID=UPI00035C22E5
H1-18-all-fractions_k255_4195933_5
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3418..4458)
DNA (1041bp) protein (347aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI000365D6D1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEK40922.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
H1-18-all-fractions_k255_4195933_6
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4490..5938)
DNA (1449bp) protein (483aa)
ATP-binding protein n=1 Tax=Actinokineospora enzanensis RepID=UPI000376C790
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
hflX; GTP-binding protein
H1-18-all-fractions_k255_4195933_7
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6065..8965
DNA (2901bp) protein (967aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI00036CA487
Helicase SNF2 {ECO:0000313|EMBL:KJK51056.1}; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
helZ; Snf2/Rad54 family helicase
H1-18-all-fractions_k255_4195933_8
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8974..9840
DNA (867bp) protein (289aa)
hypothetical protein n=1 Tax=Saccharopolyspora spinosa RepID=UPI00023797FF
SWF/SNF family helicase {ECO:0000313|EMBL:EWC63113.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
hypothetical protein
H1-18-all-fractions_k255_4195933_9
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9814..10644)
DNA (831bp) protein (277aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI000365E656
hypothetical protein
H1-18-all-fractions_k255_4195933_10
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10654..11559)
DNA (906bp) protein (302aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI000367B177
hypothetical protein
H1-18-all-fractions_k255_4195933_11
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11556..12320)
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0JPN8_SACES
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH29025.1}; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
H1-18-all-fractions_k255_4195933_12
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12577..14286
DNA (1710bp) protein (570aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI0003686F39
ATPase {ECO:0000313|EMBL:EWC58283.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
hypothetical protein
H1-18-all-fractions_k255_4195933_13
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14443..14925)
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI0003690196
Putative conserved transmembrane protein {ECO:0000313|EMBL:EWC58284.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
hypothetical protein
H1-18-all-fractions_k255_4195933_14
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14925..16355)
DNA (1431bp) protein (477aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
(dimethylallyl)adenosine tRNA methylthiotransferase n=1 Tax=Actinokineospora enzanensis RepID=UPI00037F1161
hypothetical protein
H1-18-all-fractions_k255_4195933_15
unknown

Not on your lists

16391..16645
DNA (255bp) protein (85aa)

This feature has no annotations

H1-18-all-fractions_k255_4195933_16
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16707..17444
DNA (738bp) protein (246aa)
ABC-type glutamate transporter, ATPase subunit n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0JU61_SACES
Glutamate ABC transporter ATP-binding protein {ECO:0000313|EMBL:KJK53340.1}; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
gluA; ABC-type glutamate transporter, ATPase subunit
H1-18-all-fractions_k255_4195933_17
Amycolatopsis japonica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17503..18396
DNA (894bp) protein (298aa)
Extracellular solute-binding protein family 3 n=1 Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WAD3_ACTMD
ABC transporter substrate-binding protein
ABC transporter substrate-binding protein {ECO:0000313|EMBL:AIG78271.1}; TaxID=208439 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis japonica.;"
H1-18-all-fractions_k255_4195933_18
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18475..19122
DNA (648bp) protein (216aa)
Amino acid ABC transporter permease n=1 Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1I452_9PSEU
Amino acid ABC transporter permease {ECO:0000313|EMBL:EOD70535.1}; TaxID=1292037 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM 44592.;"
Conserved putative membrane protein
H1-18-all-fractions_k255_4195933_19
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19148..20047
DNA (900bp) protein (300aa)
amino acid ABC transporter permease n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002626AAA
gluD; ectoine/hydroxyectoine ABC transporter, permease EhuD
Ectoine/hydroxyectoine ABC transporter, permease EhuD {ECO:0000313|EMBL:AIJ25094.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
H1-18-all-fractions_k255_4195933_20
unknown

Not on your lists

20213..20656
DNA (444bp) protein (148aa)

This feature has no annotations

H1-18-all-fractions_k255_4195933_21
Streptomyces roseochromogenus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20843..21772
DNA (930bp) protein (310aa)
NADPH:quinone reductase n=1 Tax=Streptomyces roseochromogenes subsp. oscitans DS 12.976 RepID=V6JG45_STRRC
NADPH:quinone reductase {ECO:0000313|EMBL:EST18815.1}; TaxID=1352936 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces roseochromogenus subsp. oscitans DS 12.976.;"
alcohol dehydrogenase GroES domain-containing protein
H1-18-all-fractions_k255_4195933_22
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21769..22515)
DNA (747bp) protein (249aa)
fumarate reductase n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI000376619C
Succinate dehydrogenase iron-sulfur protein {ECO:0000313|EMBL:CEL14869.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
fumarate reductase
H1-18-all-fractions_k255_4195933_23
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22517..24445)
DNA (1929bp) protein (643aa)
succinate dehydrogenase n=1 Tax=Amycolatopsis nigrescens RepID=UPI000374D0C2
Succinate dehydrogenase flavoprotein subunit {ECO:0000313|EMBL:AIJ25104.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
sdhA; succinate dehydrogenase flavoprotein subunit
H1-18-all-fractions_k255_4195933_24
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24455..25252)
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PN60_KRIFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB34544.1}; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
H1-18-all-fractions_k255_4195933_25
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25937..26773)
DNA (837bp) protein (279aa)
Chitooligosaccharide deacetylase n=3 Tax=Amycolatopsis mediterranei RepID=D8HW12_AMYMU
chitooligosaccharide deacetylase
Chitooligosaccharide deacetylase {ECO:0000313|EMBL:AEK38805.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
H1-18-all-fractions_k255_4195933_26
Saccharomonospora xinjiangensis, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27091..27612)
DNA (522bp) protein (174aa)
recombinase RecX n=1 Tax=Saccharomonospora saliphila RepID=UPI00035FD04C
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=882086 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora xinjiangensis XJ-54.;"
regulatory protein RecX
H1-18-all-fractions_k255_4195933_27
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(27799..28839)
DNA (1041bp) protein (347aa)
recA protein (EC:3.6.3.8)
recombinase RecA n=1 Tax=Actinokineospora enzanensis RepID=UPI00037AEA68
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;"
H1-18-all-fractions_k255_4195933_28
unknown

Not on your lists

comp(29025..29135)
DNA (111bp) protein (37aa)

This feature has no annotations

H1-18-all-fractions_k255_4195933_29
Amycolatopsis decaplanina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29170..29364
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Amycolatopsis decaplanina DSM 44594 RepID=M2XPH0_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:EME62926.1}; TaxID=1284240 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis decaplanina DSM 44594.;"
hypothetical protein
H1-18-all-fractions_k255_4195933_30
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29584..30363)
DNA (780bp) protein (260aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI00036FCB77
Molecular chaperone protein {ECO:0000313|EMBL:EWC58301.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
dnaK; molecular chaperone
Displaying 30 items

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