ggKbase home page

H2-18-all-fractions_k255_2681403_23

Organism: H2-18-all-fractions_metab_63

partial RP 28 / 55 MC: 3 BSCG 30 / 51 MC: 6 ASCG 14 / 38 MC: 4
Location: 19893..21341

Top 3 Functional Annotations

Value Algorithm Source
type II and III secretion system protein n=1 Tax=Variovorax paradoxus RepID=UPI00035D83E4 similarity UNIREF
DB: UNIREF100
  • Identity: 60.2
  • Coverage: 483.0
  • Bit_score: 526
  • Evalue 1.90e-146
Type II/IV secretion system secretin RcpA/CpaC similarity KEGG
DB: KEGG
  • Identity: 56.9
  • Coverage: 496.0
  • Bit_score: 518
  • Evalue 1.40e-144
Variovorax paradoxus strain MEDvA23 contig_61, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ26114.1}; Flags: Fragment;; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.1
  • Coverage: 474.0
  • Bit_score: 518
  • Evalue 5.50e-144

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1449
ATGAACACGCACATCCGTATTGGGGCCTGGACCATTGCGACGGCAACCATGCTGGCGCCACCGGCGGCCGGGGCGGCCGAACCGGGCACCAGGAACTGCAAGTCGGTGATCGTCGCGCCGGCCGCCCAGGTGATGCTCGGCAAAGCGTCGGTAATTCCACTGGCGGCCCCGGTCATCCGGATCGTGGCGAGCGCCCAGCCGCCGGCGGCCCCGGTCCAGCAGGCAGGCGCGCCGCCAGCCCCGGCGCCGGCCGCGGCGCCGCTCGCCACGGCGGCTGACCAGGCCAGCATTGCCGACCTCGACGTATTGCTGTTGAGCCCGACCGACCTGTTCCTGCGCGGCAAAAAGGCTGGCGCCACCAACGTCATCGTGCAGGACGCCAGCGGCGTGTGCTACCTGCGCGACATCGTGGTGGCGATCGACCCGGCGACGCTGCAGGCCAAACTGGTCGAGCTGATGCCCGAGGAAGGCGGCATCCTGGTCAAGAGCGCCGAAAACGCGATCGTGTTGACCGGCAAGGTCAGCGACAACGCCAAGCTGGACGAAGCGATGCGCCTGGCCACCGCGTATGGCGACGGCAAGCGCGTGGTCAACCTGCTGCGCGTCGCGGCGCCGCAGCAAGTGATGCTGGAGGTGAAGATCGCCGAGGTCAGCAAAACGCTGCTCGACAAGTTCGGCATCGACTTTGCCCGCATGTTCACCTCGGCCGACGGGCTCACGTCGCAGGTCATCACGGGCATCTTCGGCGGCGCGGCAGGGCTGTTCAGCAAATCCAGCGAGACCGGCGGCGGCAACCTGACCCGGATCGGGGTCAACGCCCAGAAAAAGGACGGCCTGCTGCGCGTGCTGGCCGAACCGAACATCATGGCGATCAGCGGCCAGACCGCCAGCTTCCTGTCGGGCGGCAAGATCTTCATCCCGGTCGCCAGGACGAACGACAACGGCGGCACCACGATCACCCTGCAAGAGAAGCAATTTGGCGTCGGACTGACGTTCTCGCCGACGGTGCTCGACGGCAGCCGGGTCAACCTCAAACTGGTGTCCGAGGTATCGGAACTGGCGCAGACCGGCTCGCCGTTCACCACGGTCGGCGGCGTGACCTCGGTACTGCCGTCGCTGACCAGCCGCAGTATCGACACGACGGTGCAACTGAACGACGGCCAGAGCTTCGCGGTCGCCGGACTGATCCGCAACAACGTCACCGAAACGCTCAGCCGCTTCCCGGTCCTCGGCGAGCTGCCGATCCTCGGCGCGCTGTTCCGCTCGACCGAGTTCCAGAAGGACCAGACCGAGCTGATCTTCATCGTCACGCCGCGCCTGGTGAAACCGGCCGCCGCCCTCCCCGCGCCGACCGATTACCACGGCGAACCGGGCCGCGCCGGCATCATCCTGATGGGCCGGGCGGAGGGCAAACCGGCCCCAGCCAGCGCACCCGCAGCCGACAAATAA
PROTEIN sequence
Length: 483
MNTHIRIGAWTIATATMLAPPAAGAAEPGTRNCKSVIVAPAAQVMLGKASVIPLAAPVIRIVASAQPPAAPVQQAGAPPAPAPAAAPLATAADQASIADLDVLLLSPTDLFLRGKKAGATNVIVQDASGVCYLRDIVVAIDPATLQAKLVELMPEEGGILVKSAENAIVLTGKVSDNAKLDEAMRLATAYGDGKRVVNLLRVAAPQQVMLEVKIAEVSKTLLDKFGIDFARMFTSADGLTSQVITGIFGGAAGLFSKSSETGGGNLTRIGVNAQKKDGLLRVLAEPNIMAISGQTASFLSGGKIFIPVARTNDNGGTTITLQEKQFGVGLTFSPTVLDGSRVNLKLVSEVSELAQTGSPFTTVGGVTSVLPSLTSRSIDTTVQLNDGQSFAVAGLIRNNVTETLSRFPVLGELPILGALFRSTEFQKDQTELIFIVTPRLVKPAAALPAPTDYHGEPGRAGIILMGRAEGKPAPASAPAADK*