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H2-18-all-fractions_k255_2681403

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H2-18-all-fractions_k255_2681403_1
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..551)
DNA (549bp) protein (183aa)
NADH-quinone oxidoreductase subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01358};; NADH dehydrogenase I subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; NDH-1 subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
NADH dehydrogenase (EC:1.6.99.5)
NADH dehydrogenase subunit D n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00030D8859
H2-18-all-fractions_k255_2681403_2
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(551..1144)
DNA (594bp) protein (198aa)
NADH-quinone oxidoreductase subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01357};; NADH dehydrogenase I subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; NDH-1 subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
NADH dehydrogenase subunit C n=1 Tax=Massilia niastensis RepID=UPI0003804A3B
nuoC; NADH (or F420H2) dehydrogenase, subunit C family protein
H2-18-all-fractions_k255_2681403_3
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1163..1639)
DNA (477bp) protein (159aa)
NADH-quinone oxidoreductase subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01356};; NADH dehydrogenase I subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; NDH-1 subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
nuoB; NADH dehydrogenase subunit B (EC:1.6.5.3)
NADH dehydrogenase subunit B n=1 Tax=Massilia niastensis RepID=UPI000366FCFA
H2-18-all-fractions_k255_2681403_4
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1643..2038)
DNA (396bp) protein (132aa)
nuoA; NADH dehydrogenase I subunit A (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01394};; NADH dehydrogenase I subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NDH-1 subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NUO1 {ECO:0000256|HAMAP-Rule:MF_01394}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
NADH-quinone oxidoreductase subunit A n=3 Tax=Herbaspirillum RepID=D8IRF5_HERSS
H2-18-all-fractions_k255_2681403_5
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2459..2896)
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003734EF7
Preprotein translocase subunit SecG {ECO:0000313|EMBL:KGF82496.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
secG; preprotein translocase, SecG subunit
H2-18-all-fractions_k255_2681403_6
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2937..3650)
DNA (714bp) protein (238aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
cbbJ; Triosephosphate isomerase (EC:5.3.1.1)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000382C039
H2-18-all-fractions_k255_2681403_7
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3803..4783)
DNA (981bp) protein (327aa)
qor1; NADPH2:quinone reductase (EC:1.6.5.5)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DED6_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EKU82608.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
H2-18-all-fractions_k255_2681403_8
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5030..6310
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DZF5_9BURK
Lipolytic enzyme, G-D-S-L {ECO:0000313|EMBL:KFC76461.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
putative GDSL-like lipase/acylhydrolase
H2-18-all-fractions_k255_2681403_9
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6314..6925)
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00036407BA
Sel1-like repeat-containing serine/threonine protein kinase {ECO:0000313|EMBL:KFC76460.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
sel1 repeat family protein
H2-18-all-fractions_k255_2681403_10
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6992..7759)
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003730C6E
Uncharacterized protein {ECO:0000313|EMBL:KFI06661.1}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
putative uncharacterized protein
H2-18-all-fractions_k255_2681403_11
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8154..10049)
DNA (1896bp) protein (632aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00037426FD
Histidine kinase {ECO:0000313|EMBL:KFI06664.1}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
PAS/PAC sensor hybrid histidine kinase
H2-18-all-fractions_k255_2681403_12
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10061..11392)
DNA (1332bp) protein (444aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00036D5429
hypothetical protein
H2-18-all-fractions_k255_2681403_13
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11389..12420)
DNA (1032bp) protein (344aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003686A37
Putative anti-sigma regulatory factor, serine/threonine protein kinase {ECO:0000313|EMBL:KFC66652.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
anti-sigma regulatory factor
H2-18-all-fractions_k255_2681403_14
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12408..12875)
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003625373
Serine/threonine protein kinase {ECO:0000313|EMBL:KFC66651.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
putative anti-sigma regulatory factor serine/threonine protein kinase
H2-18-all-fractions_k255_2681403_15
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12875..13231)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DH26_9BURK
RsbT antagonist protein RsbS {ECO:0000313|EMBL:KFC66650.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
anti-sigma-factor antagonist
H2-18-all-fractions_k255_2681403_16
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(13242..14111)
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00035CD37B
Anti-sigma factor antagonist {ECO:0000313|EMBL:KFI06668.1}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
anti-sigma-factor antagonist
H2-18-all-fractions_k255_2681403_17
Nitrosococcus oceani, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14274..14831)
DNA (558bp) protein (186aa)
Acetyltransferase, GNAT family n=1 Tax=Nitrosococcus oceani AFC27 RepID=B6C5H0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KFI18243.1}; TaxID=314279 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus oceani C-27.;"
H2-18-all-fractions_k255_2681403_18
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(14842..15783)
DNA (942bp) protein (314aa)
Putative uncharacterized protein n=2 Tax=Nitrosococcus oceani RepID=Q3J737_NITOC
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
H2-18-all-fractions_k255_2681403_19
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(15780..16739)
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y614_NITMU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB75807.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
H2-18-all-fractions_k255_2681403_20
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16934..18100)
DNA (1167bp) protein (389aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
Histidine kinase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YAB8_NITMU
histidine kinase
H2-18-all-fractions_k255_2681403_21
Collimonas arenae, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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18446..19024
DNA (579bp) protein (193aa)
peptidase A24 n=1 Tax=Variovorax paradoxus RepID=UPI00037213AE
Type IV prepilin peptidase TadV/CpaA
Type IV prepilin peptidase TadV/CpaA {ECO:0000313|EMBL:AIY42958.1}; TaxID=279058 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas arenae.;"
H2-18-all-fractions_k255_2681403_22
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19041..19871
DNA (831bp) protein (277aa)
Flp pilus assembly protein CpaB n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CT44_VARPS
Flp pilus assembly protein CpaB
Flp pilus assembly protein CpaB {ECO:0000313|EMBL:ACS18169.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
H2-18-all-fractions_k255_2681403_23
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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19893..21341
DNA (1449bp) protein (483aa)
type II and III secretion system protein n=1 Tax=Variovorax paradoxus RepID=UPI00035D83E4
Type II/IV secretion system secretin RcpA/CpaC
Variovorax paradoxus strain MEDvA23 contig_61, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ26114.1}; Flags: Fragment;; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
H2-18-all-fractions_k255_2681403_24
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21352..21624
DNA (273bp) protein (91aa)
tRNA dimethylallyltransferase (EC:2.5.1.75)
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2K8B1_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KGF83024.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
H2-18-all-fractions_k255_2681403_25
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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21780..21986
DNA (207bp) protein (69aa)
Putative uncharacterized protein n=1 Tax=Comamonas testosteroni S44 RepID=D8D9I8_COMTE
hypothetical protein
Variovorax paradoxus strain MEDvA23 contig_61, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ26116.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
H2-18-all-fractions_k255_2681403_26
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22037..22243
DNA (207bp) protein (69aa)
pilus subunit protein PilA n=1 Tax=Variovorax paradoxus RepID=UPI00035DEA29
hypothetical protein
Variovorax paradoxus strain MEDvA23 contig_61, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ26116.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
H2-18-all-fractions_k255_2681403_27
Collimonas arenae, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22304..23620
DNA (1317bp) protein (439aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00035CA3A0
Von Willebrand factor type A domain protein
Von Willebrand factor type A domain protein {ECO:0000313|EMBL:AIY42964.1}; TaxID=279058 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas arenae.;"
H2-18-all-fractions_k255_2681403_28
Collimonas arenae, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23626..24054
DNA (429bp) protein (143aa)
TadE family protein n=1 Tax=Comamonas testosteroni S44 RepID=D8D9J0_COMTE
TadZ/CpaE-like protein
TadZ/CpaE-like protein {ECO:0000313|EMBL:AIY42965.1}; TaxID=279058 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas arenae.;"
H2-18-all-fractions_k255_2681403_29
Collimonas arenae, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24051..24479
DNA (429bp) protein (143aa)
TadE-like family protein n=1 Tax=Variovorax paradoxus B4 RepID=T1X731_VARPD
TadZ/CpaE-like protein
TadZ/CpaE-like protein {ECO:0000313|EMBL:AIY42966.1}; TaxID=279058 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas arenae.;"
H2-18-all-fractions_k255_2681403_30
Collimonas arenae, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24501..25676
DNA (1176bp) protein (392aa)
histidine kinase n=1 Tax=Variovorax paradoxus RepID=UPI0003676EFA
Type II/IV secretion system ATPase TadZ/CpaE
Type II/IV secretion system ATPase TadZ/CpaE {ECO:0000313|EMBL:AIY42967.1}; TaxID=279058 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas arenae.;"
Displaying items 1-30 of 38 in total

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