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H2-18-all-fractions_k255_4711733_1

Organism: H2-18-all-fractions_metab_63

partial RP 28 / 55 MC: 3 BSCG 30 / 51 MC: 6 ASCG 14 / 38 MC: 4
Location: 418..2931

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.6
  • Coverage: 843.0
  • Bit_score: 1328
  • Evalue 0.0
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00038287F8 similarity UNIREF
DB: UNIREF100
  • Identity: 81.6
  • Coverage: 851.0
  • Bit_score: 1373
  • Evalue 0.0
3'-to-5' exoribonuclease RNase R similarity KEGG
DB: KEGG
  • Identity: 71.4
  • Coverage: 840.0
  • Bit_score: 1190
  • Evalue 0.0

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Taxonomy

Massilia sp. LC238 → Massilia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2514
TTGAAGCAACCTACACATACTATTCCAAGCCGCGAGGAAATCCTCGCCGTCTTCCGCGACAGCAGCGCGCCGCTCGATGCAGCTGCGCTGGCACGCGAACTGAAGGTCAAGCCCGCGGCGCGCGAGATCCTGGAGCGCCGGCTGAACGCGATGGAGCGCGACGGCCAGATCCGCCTCGATCGTTCCGGCACATACGCTTTGCTCGACCAGTCCGCCTTTGTCGCGGGCCGCGTCAGCGCGCACCGCGATGGCTTCGGGTTCGTGATCCCGGACGACGCCAGCGAGGACCTGTTCCTGTCCGATAAAGAAATGCAGAAGGTGCTGCACGGCGACCGCGTCATGGCGCGCGTCTCGGGCACCGACCGCCGCGGCCGGCCCGAGGGCACGATTGTCGAGGTGGTCGAACGCGCCAACACGCACATCATCGGACGCCTGCTGAACGAGGGCGGCGTCTGGATCGTGTCGCCGGAAGACAAGCGCATCAGCCAGGACGTGCTGGTTGCCGGCACGCCGGGCAAGGCCAAGGCGGGGCAGGTGGTGAGCGTCGAGTTGATCGAGCAGCCGTCGCGTTTCCAGCAGCCGACCGGCAGGGTGGTCGAGGTGCTCGGCGAACTCGACGACCCGGGCATGGAAATCGAAATCGCGGTGCGCAAGTTTGGCGTGCCACATATTTTCTCGCCGCCCGCGCTCAAGCAGGCCGCGAAGCTGCCGGGCGAAGTGCGCGAGGCCGACCTCGAAGGCCGGGTCGACCTGCGCGATGTGCCGCTGGTGACCATCGATGGCGAGGACGCGCGCGACTTCGACGACGCGGTCTATTGCGAGCCGGTGAAGATCGGCCGCGCCAACGGCTTCCGCCTGATCGTCGCGATTGCCGACGTCAGCCATTACGTGAAGCCCAACGATTCCCTCGACGCCGACGCGCTCGAGCGCAGCACCTCGGTGTACTTCCCGCGCCGCGTGATCCCGATGCTGCCCGAAAAGCTGTCCAACGGGCTGTGTTCGCTGAACCCGGCGGTCGACCGTTGCACGCTGGCCTGCGACATGGTCGTTACGGCCGACGGCGAAGTCACCGCCTACCAGTTCTACCCGGCGGTGATCCACTCGGCGGCGCGCCTGACCTACAACGAAGTGGCCGAAATCCTGGGCAACACCAGCGGGCCTGAAGCGCAGCGCCGTCCGGCCATCGTGCCACACCTGCTGAACCTGAACGACGTGTTCCACGCGCTGCTCAAGGCGCGCCAGGAACGTGGCGCGATCGATTTCGAGACCACCGAAACCTATATCGTCTGCAACGCGCTGGGCAAGATCGAAAAGATCATCCCGCGCACCCGCAACGAGGCGCACAAGCTGATCGAAGAATGCATGCTGGCGGCCAACGTGTGCGCAGCCGACCTGCTGATCCGCAACAAGCACCCGGGCACGTTCCGTATCCACGCGGTGCCGACCGAGGAAAAGCTGAACCAGCTGCGCACCTTCCTCAAGCAGACCGGCCTGAACCTGGGCGGCGGCACCGAGCCGAGCGCGCGCGATTACGCCGAGCTGATGCAGCAGATCAAGGAACGCCCGGACGCGACGCTGCTGCAGACCATGCTGCTACGCTCGATGCAGCAGGCGGTCTACAGCCCGGACAACGTCGGCCACTTCGGCCTGGCCTACGAGGCGTATGCCCACTTCACCAGCCCGATCCGGCGCTACCCGGACCTGCTGACGCACCGCGCGATCAAGGCCATTTTGCAAGGCAAGAAGTACGAGCCGAAGGGCATCGAGGCGTCGAAGCTGAACACGACGATGTCGAAGTCCGGCCGCAAGCAAATGGCCAAGGACCGCGCCGAAGGCAAGCAAAAGGACGAGCGCGACCTGACCATCTGGGATGCGCTGGGCGTGCACTGCTCGGCCAACGAGCGCCGCGCCGACGAAGCCTCGCGCGACGTCGAGAACTGGCTCAAGTGCTACTTCATCAAGGACAAGCTGGGTGAGGAATTCACCGGCGTCGTGTCCGGCGTTACGCCGTTCGGCATCTTCGTGCAGCTCGACCAGCTGTATGTCGAAGGCCTTGTGCACGTGACCGAACTGGGTCAGGATTACTTCCAGTACGACGAGGTGCGCCACGAACTGCGTGGCGACCGCACCGGCAAGCGTTTCGCGCTGACCGACCGCGTGACCGTCCAGGTTGCCCGCGTCGACCTGGAAGCGCGCAAGATCGACCTGGTGCTGGCCGACTCGTCGAAGGAGATGTCGGCGGACCAGGTGCGCGCGCGGGCAAGCTCGCAGGATGGGAAGCCGTCCAGGAAATCGCGCAGGCCGGAGCCGCAGCCGCAGCAGCAAGTGGCGTCGCGCAACCAGGTCGACATGGTCGACGAGGCGGACATCGAACTGGTCAAGCCGCCGCGCCGCGCGCGCGCGGGCAAGACCGCCAGCGCGGCCACCAAGAACGGCGCCACGAACGGCGCCAAGAAGACCGCAGCCAAGAAAGCGGCAAAAACAGTTTCCAAAACAAGCAGGAAGAAGACGTAA
PROTEIN sequence
Length: 838
LKQPTHTIPSREEILAVFRDSSAPLDAAALARELKVKPAAREILERRLNAMERDGQIRLDRSGTYALLDQSAFVAGRVSAHRDGFGFVIPDDASEDLFLSDKEMQKVLHGDRVMARVSGTDRRGRPEGTIVEVVERANTHIIGRLLNEGGVWIVSPEDKRISQDVLVAGTPGKAKAGQVVSVELIEQPSRFQQPTGRVVEVLGELDDPGMEIEIAVRKFGVPHIFSPPALKQAAKLPGEVREADLEGRVDLRDVPLVTIDGEDARDFDDAVYCEPVKIGRANGFRLIVAIADVSHYVKPNDSLDADALERSTSVYFPRRVIPMLPEKLSNGLCSLNPAVDRCTLACDMVVTADGEVTAYQFYPAVIHSAARLTYNEVAEILGNTSGPEAQRRPAIVPHLLNLNDVFHALLKARQERGAIDFETTETYIVCNALGKIEKIIPRTRNEAHKLIEECMLAANVCAADLLIRNKHPGTFRIHAVPTEEKLNQLRTFLKQTGLNLGGGTEPSARDYAELMQQIKERPDATLLQTMLLRSMQQAVYSPDNVGHFGLAYEAYAHFTSPIRRYPDLLTHRAIKAILQGKKYEPKGIEASKLNTTMSKSGRKQMAKDRAEGKQKDERDLTIWDALGVHCSANERRADEASRDVENWLKCYFIKDKLGEEFTGVVSGVTPFGIFVQLDQLYVEGLVHVTELGQDYFQYDEVRHELRGDRTGKRFALTDRVTVQVARVDLEARKIDLVLADSSKEMSADQVRARASSQDGKPSRKSRRPEPQPQQQVASRNQVDMVDEADIELVKPPRRARAGKTASAATKNGATNGAKKTAAKKAAKTVSKTSRKKT*