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H2-18-all-fractions_k255_4711733

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Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H2-18-all-fractions_k255_4711733_1
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

418..2931
DNA (2514bp) protein (838aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00038287F8
3'-to-5' exoribonuclease RNase R
H2-18-all-fractions_k255_4711733_2
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2935..3675
DNA (741bp) protein (247aa)
23S rRNA (guanosine-2'-O-)-methyltransferase RlmB {ECO:0000256|HAMAP-Rule:MF_01887}; EC=2.1.1.185 {ECO:0000256|HAMAP-Rule:MF_01887};; 23S rRNA (guanosine2251 2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01887}; 23S rRNA Gm2251 2'-O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01887}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
23S rRNA (guanosine-2''''-O-)-methyltransferase n=1 Tax=Duganella zoogloeoides RepID=UPI000361B80B
RNA 2'-O ribose methyltransferase substrate binding family protein
H2-18-all-fractions_k255_4711733_3
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3909..4646
DNA (738bp) protein (246aa)
Serine acetyltransferase {ECO:0000256|PIRNR:PIRNR000441}; EC=2.3.1.30 {ECO:0000256|PIRNR:PIRNR000441};; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
cysE; serine O-acetyltransferase (EC:2.3.1.30)
serine O-acetyltransferase n=1 Tax=Massilia niastensis RepID=UPI0003610CF1
H2-18-all-fractions_k255_4711733_4
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4654..5340
DNA (687bp) protein (229aa)
UPF0502 protein HMPREF9710_04282 n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DB05_9BURK
UPF0502 protein IA69_15245 {ECO:0000256|HAMAP-Rule:MF_01584}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
yceH; UPF0502 protein yceH
H2-18-all-fractions_k255_4711733_5
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5475..6461)
DNA (987bp) protein (329aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003613618
Uncharacterized protein {ECO:0000313|EMBL:KFC67450.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
hypothetical protein
H2-18-all-fractions_k255_4711733_6
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6458..7315)
DNA (858bp) protein (286aa)
multidrug ABC transporter ATP-binding protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00035F457C
Multidrug ABC transporter ATP-binding protein {ECO:0000313|EMBL:KFI05701.1}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
multidrug ABC transporter ATP-binding protein
H2-18-all-fractions_k255_4711733_7
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7312..7680)
DNA (369bp) protein (123aa)
GntR family transcriptional regulator n=1 Tax=Massilia niastensis RepID=UPI00036A813C
GntR family transcriptional regulator {ECO:0000313|EMBL:KFI05700.1}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
GntR family transcriptional regulator
H2-18-all-fractions_k255_4711733_8
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8181..8927)
DNA (747bp) protein (249aa)
UDP-2,3-diacylglucosamine hydrolase {ECO:0000256|HAMAP-Rule:MF_00575, ECO:0000256|SAAS:SAAS00063966}; EC=3.6.1.54 {ECO:0000256|HAMAP-Rule:MF_00575, ECO:0000256|SAAS:SAAS00063978};; UDP-2,3-diacylglucosamine diphosphatase {ECO:0000256|HAMAP-Rule:MF_00575}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
lpxH; UDP-2,3-diacylglucosamine hydrolase (EC:3.6.1.-)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00036A38B4
H2-18-all-fractions_k255_4711733_9
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8967..9458)
DNA (492bp) protein (164aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
cyp18; peptidyl-prolyl cis-trans isomerase cyp18 (EC:5.2.1.8)
cyclophilin n=1 Tax=Massilia niastensis RepID=UPI00037F0CEE
H2-18-all-fractions_k255_4711733_10
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9509..10117)
DNA (609bp) protein (203aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
cyp18; peptidyl-prolyl cis-trans isomerase cyp18 domain protein (EC:5.2.1.8)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00035D36B0
H2-18-all-fractions_k255_4711733_11
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10376..11764
DNA (1389bp) protein (463aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16)
cysteinyl-tRNA synthetase n=1 Tax=Massilia niastensis RepID=UPI0003748DFC
H2-18-all-fractions_k255_4711733_12
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11765..12424
DNA (660bp) protein (220aa)
DNA-3-methyladenine glycosylase n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI00034A94F3
DNA-3-methyladenine glycosylase {ECO:0000313|EMBL:KGF80891.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
hhH-GPD superbase excision DNA repair family protein
H2-18-all-fractions_k255_4711733_13
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12481..13458
DNA (978bp) protein (326aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00176990}; Short=ACCase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00057486};; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit (EC:6.4.1.2)
acetyl-CoA carboxylase subunit alpha n=1 Tax=Massilia niastensis RepID=UPI00035CBAAD
H2-18-all-fractions_k255_4711733_14
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13455..14966
DNA (1512bp) protein (504aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161, ECO:0000256|SAAS:SAAS00043109}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161, ECO:0000256|SAAS:SAAS00043112};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
tilS; tRNA(Ile)-lysidine synthetase (EC:6.3.4.-)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00035D16C9
H2-18-all-fractions_k255_4711733_15
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15137..16348
DNA (1212bp) protein (404aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
lysC; aspartokinase (EC:2.7.2.4)
Aspartokinase n=1 Tax=Massilia timonae CCUG 45783 RepID=K9D889_9BURK
H2-18-all-fractions_k255_4711733_16
R_Curvibacter_63_18, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16687..17442
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000360055B
phage integrase
Tax=RIFCSPHIGHO2_12_FULL_Curvibacter_63_18_curated
H2-18-all-fractions_k255_4711733_17
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17514..17894
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Duganella zoogloeoides RepID=UPI00037FA793
Integrase-like protein {ECO:0000313|EMBL:ELX13506.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
Integrase
H2-18-all-fractions_k255_4711733_18
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18133..18555
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PH63_9BURK
Uncharacterized protein {ECO:0000313|EMBL:ELX10208.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
hypothetical protein
H2-18-all-fractions_k255_4711733_19
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18803..19468
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00037F929E
NAD-dependent dehydratase {ECO:0000313|EMBL:KGF83335.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
hypothetical protein
H2-18-all-fractions_k255_4711733_20
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19490..19747)
DNA (258bp) protein (86aa)
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UXF4_VARPE
molybdopterin binding aldehyde oxidase and xanthine dehydrogenase protein
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein {ECO:0000313|EMBL:ADU38871.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
H2-18-all-fractions_k255_4711733_21
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19811..21232)
DNA (1422bp) protein (474aa)
Putative oxidoreductase n=1 Tax=Advenella kashmirensis (strain DSM 17095 / LMG 22695 / WT001) RepID=I3UCX8_ADVKW
putative oxidoreductase
Putative oxidoreductase {ECO:0000313|EMBL:AFK62866.1}; TaxID=1036672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirensis (strain DSM 17095 / LMG 22695 / WT001); (Tetrathiobacter kashmirensis).;"
H2-18-all-fractions_k255_4711733_22
Pseudomonas sp. GM48, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21422..22309
DNA (888bp) protein (296aa)
Transcriptional regulator n=2 Tax=Pseudomonas RepID=J2RPC8_9PSED
Transcriptional regulator {ECO:0000313|EMBL:EJM51264.1}; TaxID=1144330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM48.;"
LysR family transcriptional regulator
H2-18-all-fractions_k255_4711733_23
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22321..23388
DNA (1068bp) protein (356aa)
Arabinose efflux permease family protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YRX6_9RHIZ
Arabinose efflux permease family protein {ECO:0000313|EMBL:EIM26718.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
hypothetical protein
H2-18-all-fractions_k255_4711733_24
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23385..23603
DNA (219bp) protein (73aa)
Arabinose efflux permease family protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YRX6_9RHIZ
Arabinose efflux permease family protein {ECO:0000313|EMBL:EIM26718.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
major facilitator superfamily MFS_1
H2-18-all-fractions_k255_4711733_25
Rubinisphaera brasiliensis, Rubinisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

23614..23844
DNA (231bp) protein (77aa)
4-oxalocrotonate tautomerase n=1 Tax=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) RepID=F0SSV8_PLABD
4-oxalocrotonate tautomerase
4-oxalocrotonate tautomerase {ECO:0000313|EMBL:ADY61436.1}; TaxID=756272 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="Rubinisphaera brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 /; NBRC 103401 / IFAM 1448) (Planctomyces brasiliensis).;"
H2-18-all-fractions_k255_4711733_26
Halomonas salina, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23866..24504
DNA (639bp) protein (213aa)
Putative oxidoreductase n=1 Tax=Pseudomonas brassicacearum (strain NFM421) RepID=F2KA31_PSEBN
Transmembrane reductase oxidoreductase {ECO:0000313|EMBL:KGE76959.1}; TaxID=42565 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas salina.;"
oxidoreductase
H2-18-all-fractions_k255_4711733_27
Mangrovibacter sp. MFB070, Mangrovibacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24688..25542
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Vibrio fluvialis I21563 RepID=S7JUZ9_VIBFL
Uncharacterized protein {ECO:0000313|EMBL:KEA54519.1}; TaxID=1224318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Mangrovibacter.;" source="Mangrovibacter sp. MFB070.;"
hypothetical protein
H2-18-all-fractions_k255_4711733_28
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25630..26700
DNA (1071bp) protein (357aa)
Cystathione beta-lyase n=1 Tax=Bacteroides thetaiotaomicron dnLKV9 RepID=R9HHH0_BACT4
Uncharacterized protein {ECO:0000313|EMBL:KKB51469.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HGS0025.;"
aminotransferase
H2-18-all-fractions_k255_4711733_29
Azotobacter vinelandii, Azotobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26743..27021
DNA (279bp) protein (93aa)
Uncharacterized protein n=3 Tax=Azotobacter vinelandii RepID=M9YAW6_AZOVI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACO79707.1}; TaxID=322710 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Azotobacter.;" source="Azotobacter vinelandii (strain DJ / ATCC BAA-1303).;"
H2-18-all-fractions_k255_4711733_30
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27152..28702
DNA (1551bp) protein (517aa)
Sodium/hydrogen exchanger family protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HTG8_RUBGI
sodium/hydrogen exchanger family protein
Sodium/hydrogen exchanger family protein {ECO:0000313|EMBL:BAL96305.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Displaying items 1-30 of 48 in total

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