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H3-16-all-fractions_k255_4904259_1

Organism: H3-16-all-fractions_metab_64

near complete RP 45 / 55 MC: 6 BSCG 42 / 51 MC: 10 ASCG 9 / 38 MC: 2
Location: comp(3..1046)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.9
  • Coverage: 348.0
  • Bit_score: 573
  • Evalue 1.40e-160
DNA-directed RNA polymerase subunit beta n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFN8_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 83.9
  • Coverage: 348.0
  • Bit_score: 573
  • Evalue 9.70e-161
rpoB; DNA-directed RNA polymerase subunit beta similarity KEGG
DB: KEGG
  • Identity: 54.3
  • Coverage: 348.0
  • Bit_score: 400
  • Evalue 3.20e-109

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1044
ATGCCATCGCGAGCAACAGCAGAACGAATTAACTTCGGTAAAATCAAAGAAATCATCGCTCCGCCGAATCTCATCGAATTGCAGACCAATTCGTACAAAGAGTTTCTGCAGGCGGAGATTCCCCAGTCCAAGCGCAAAAACCTTGGGCTGCAGGCCGTCTTCACCGAGGTGTTTCCCATCGAGAGCTACGACGGGAAATGCGTGCTCGATTTCCATTCCTATGAAATCGGCGAACCGAAGCTCGATTGGCTCGAGTGCCTGCGCGAGGGCCTGACCTATGGCGCTCCGCTCTACGTTACGTTCCTGCTCAAGGAAGAAAAGGGCACCAAGGAAGAGAAAGTGTTCATGGGCGAATTGCCGCTCATTAAGCCGCAGGGCCCCATTGTCATCAACGTCGCTGAACGCGTCATAGTCAGCCAGTTGCATCGCTCGCCAGGTCTTGCCTTCGAAGCGACGCAGCATCCCAACGGCAAAACGCTACATTCCTTCCGCATTATTCCCGATCGTGGTTCGTGGTATGAAGCGCAGTTCGACACGAGCGATTTGCTTTATGTGTATCTCGACCGCAAGAAACGCCGCCGGAAATTTTTGACCACCACGTTCTTCCGCGCTCTGAGCTTCCTCGATGACGAATCGAAGGGCGGCGACAAGAAACGCGATGCCACCAAGACCGGCACTGACGAGGAAATCTTGAAGCTCTTTTACGATGTCGAAGAGATGTCCGTGAAGGAAGCCGAGAAGCTCGATGATTTGCCGAACAAGGTATTGATCGAGGACGCCACGGACTCAGAAAAGGGACTCGTGGTCGCGCGCGCTTTTGAACCGCTGTCCAAAGCGGTCGTGAAGCAGATCGCCGAACTCGGCGTGACCAAAATCAAGGTCGTGGACACGACTGCTGACGAAGGGATCGTCATCAAGTGCATGAAGAAGGATCCCGCGAAGAATGAAGAAGAGGCGTTGAATGATATCTATCGCCGTCTTCGTCAGGGCGATCCGCAGACTGCCGCCAATGCGCTAGCTCTCATCAAACGGTTGTTCTTCGAT
PROTEIN sequence
Length: 348
MPSRATAERINFGKIKEIIAPPNLIELQTNSYKEFLQAEIPQSKRKNLGLQAVFTEVFPIESYDGKCVLDFHSYEIGEPKLDWLECLREGLTYGAPLYVTFLLKEEKGTKEEKVFMGELPLIKPQGPIVINVAERVIVSQLHRSPGLAFEATQHPNGKTLHSFRIIPDRGSWYEAQFDTSDLLYVYLDRKKRRRKFLTTTFFRALSFLDDESKGGDKKRDATKTGTDEEILKLFYDVEEMSVKEAEKLDDLPNKVLIEDATDSEKGLVVARAFEPLSKAVVKQIAELGVTKIKVVDTTADEGIVIKCMKKDPAKNEEEALNDIYRRLRQGDPQTAANALALIKRLFFD