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H3-16-all-fractions_k255_4904259

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-16-all-fractions_k255_4904259_1
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(3..1046)
DNA (1044bp) protein (348aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
DNA-directed RNA polymerase subunit beta n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFN8_9BACT
rpoB; DNA-directed RNA polymerase subunit beta
H3-16-all-fractions_k255_4904259_2
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(1270..1665)
DNA (396bp) protein (132aa)
50S ribosomal protein L7/L12 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFN9_9BACT
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
rplJL; fused 50S ribosomal proteins L10 and L7/L12
H3-16-all-fractions_k255_4904259_3
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(1799..2308)
DNA (510bp) protein (170aa)
50S ribosomal protein L10 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFP0_9BACT
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
50S ribosomal protein L10
H3-16-all-fractions_k255_4904259_4
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(2335..3030)
DNA (696bp) protein (232aa)
50S ribosomal protein L1 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFP1_9BACT
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
rplA; 50S ribosomal protein L1
H3-16-all-fractions_k255_4904259_5
unknown

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comp(3093..3311)
DNA (219bp) protein (73aa)

This feature has no annotations

H3-16-all-fractions_k255_4904259_6
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(3345..3770)
DNA (426bp) protein (142aa)
50S ribosomal protein L11 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFP2_9BACT
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
rplK; 50S ribosomal protein L11
H3-16-all-fractions_k255_4904259_7
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(3851..4399)
DNA (549bp) protein (183aa)
Transcription termination/antitermination protein NusG n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFP3_9BACT
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
antitermination protein NusG
H3-16-all-fractions_k255_4904259_8
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(4419..4688)
DNA (270bp) protein (90aa)
Protein translocase subunit SecE n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFP4_9BACT
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
preprotein translocase subunit SecE
Displaying 8 items

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