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H3-16-all-fractions_k255_752086_3

Organism: H3-16-all-fractions_metab_64

near complete RP 45 / 55 MC: 6 BSCG 42 / 51 MC: 10 ASCG 9 / 38 MC: 2
Location: comp(1313..2026)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.7
  • Coverage: 236.0
  • Bit_score: 365
  • Evalue 5.00e-98
tRNA pseudouridine synthase B n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFC5_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 76.7
  • Coverage: 236.0
  • Bit_score: 365
  • Evalue 3.60e-98
tRNA pseudouridine synthase B similarity KEGG
DB: KEGG
  • Identity: 55.3
  • Coverage: 235.0
  • Bit_score: 270
  • Evalue 4.40e-70

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 714
ATGCAAGAATTCTCGGCGCTGGATGGCGCCATTCTTATTGATAAACCCTCCGGGCCGACTTCGCACGATGTCGTGGATGAGATTCGCCGGCAGTTCGGCATTAAAAAGGTCGGGCACTGCGGGACGCTCGACCCGAATGCAACTGGTCTGCTCATCATCGTGCTGGGGCGCGGCACAAAGCTTTCGGAAAAGTTGATGTCCGACGACAAAGTGTACGAGGGCACCATCAAGTTCGGCGAGGCCACGGACAGCTACGATTCCGACGGCGAGTTGACGGGTTCCCTGCCCGTCCCGCCACTGACGGTCGAAGAGTTGAACCAGGCCGGCGAGGAATTCGTGGGCGATATCATGCAGACGCCGCCGATGGTTTCGGCCATCAAGAAGGACGGCGTCCCGCTTTACAAGTTGGCGCGCAAAGGCGTGGAAGTGCCACGGGAGCCGCGGCTGATTCACATTTACAAGTTTCGTTTTTCCAAATACGAGGAGCCGCTCGCGGAGTTTCGATTGGCATGCACCAAGGGGACTTATGTGCGCAGTGTGGCGCATGAGTTGGGGCAGAAGATCGGCTGCGGGGCGCATCTGGCGCAATTGCGGCGCGTTGTTTCCGGAAAGTTTGACGTGGCGGATGCGAAGCCGCTGGATGACGTGTTGAGAATGCCTGTGTACGAGTTGGAGAAAAGAGTTATTCCGTTTTTGAAATTGGCTGGAGCATGA
PROTEIN sequence
Length: 238
MQEFSALDGAILIDKPSGPTSHDVVDEIRRQFGIKKVGHCGTLDPNATGLLIIVLGRGTKLSEKLMSDDKVYEGTIKFGEATDSYDSDGELTGSLPVPPLTVEELNQAGEEFVGDIMQTPPMVSAIKKDGVPLYKLARKGVEVPREPRLIHIYKFRFSKYEEPLAEFRLACTKGTYVRSVAHELGQKIGCGAHLAQLRRVVSGKFDVADAKPLDDVLRMPVYELEKRVIPFLKLAGA*