ggKbase home page

H3-16-all-fractions_k255_752086

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-16-all-fractions_k255_752086_1
unknown

Not on your lists

comp(2..127)
DNA (126bp) protein (42aa)

This feature has no annotations

H3-16-all-fractions_k255_752086_2
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(244..1167)
DNA (924bp) protein (308aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
riboflavin kinase/FMN adenylyltransferase (EC:2.7.7.2)
Riboflavin biosynthesis protein RibF n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFC6_9BACT
H3-16-all-fractions_k255_752086_3
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(1313..2026)
DNA (714bp) protein (238aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
tRNA pseudouridine synthase B n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFC5_9BACT
tRNA pseudouridine synthase B
H3-16-all-fractions_k255_752086_4
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(2032..3015)
DNA (984bp) protein (328aa)
Phosphoesterase RecJ domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFC3_9BACT
Phosphoesterase RecJ domain protein {ECO:0000313|EMBL:EEF61287.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
phosphoesterase RecJ domain-containing protein
H3-16-all-fractions_k255_752086_5
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(3049..3414)
DNA (366bp) protein (122aa)
Ribosome-binding factor A n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFC2_9BACT
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
rbfA; ribosome-binding factor A
H3-16-all-fractions_k255_752086_6
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(3487..3840)
DNA (354bp) protein (118aa)
Translation initiation factor IF-2 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFC1_9BACT
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
infB; translation initiation factor 2, GTPase
Displaying 6 items

View Taxonomy