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H3-18-all-fractions_k255_4857172_20

Organism: H3-18-all-fractions_metab_conc_4

partial RP 29 / 55 MC: 5 BSCG 29 / 51 MC: 4 ASCG 9 / 38 MC: 1
Location: 17213..17428

Top 3 Functional Annotations

Value Algorithm Source
Cold shock protein (Beta-ribbon, CspA family) n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IHK7_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 98.6
  • Coverage: 70.0
  • Bit_score: 144
  • Evalue 3.00e-32
Cold-shock protein {ECO:0000313|EMBL:KJC44921.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 71.0
  • Bit_score: 146
  • Evalue 1.10e-32
cspA; DNA binding cold shock protein similarity KEGG
DB: KEGG
  • Identity: 97.2
  • Coverage: 71.0
  • Bit_score: 144
  • Evalue 1.10e-32

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Taxonomy

Bradyrhizobium sp. LTSP885 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 216
ATGGCCATGACTGGGACAGTCAAGTTCTTCAATGGAGAGCGTGGCTACGGCTTCATCAAGCCCGATGACGGCGGCCGCGATGTGTTCGTTCACATCACAGCCGTCGAGCGGGCCGGATTGAAGGATTTGACCGAAGGACAGCGCATTACATTCGAGGTCGAACCGGACAAGAAGGGCAAAGGCCCCAAAGCGGTCAATCTGGTGATTTCATCGTGA
PROTEIN sequence
Length: 72
MAMTGTVKFFNGERGYGFIKPDDGGRDVFVHITAVERAGLKDLTEGQRITFEVEPDKKGKGPKAVNLVISS*