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H3-18-all-fractions_k255_4857172

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-18-all-fractions_k255_4857172_1
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..798
DNA (798bp) protein (266aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
prolipoprotein diacylglyceryl transferase n=1 Tax=Bradyrhizobium elkanii RepID=UPI000378E66F
prolipoprotein diacylglyceryl transferase
H3-18-all-fractions_k255_4857172_2
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

807..1931
DNA (1125bp) protein (375aa)
Cytochrome d ubiquinol oxidase subunit I n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H0H5_9BRAD
ATP synthase subunit beta {ECO:0000313|EMBL:KJC44937.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
hypothetical protein
H3-18-all-fractions_k255_4857172_3
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1928..2695
DNA (768bp) protein (256aa)
polyphenol oxidase n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002F41B64
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein
H3-18-all-fractions_k255_4857172_4
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2818..3447
DNA (630bp) protein (210aa)
signal peptide protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI0003711D98
Signal peptide protein {ECO:0000313|EMBL:KJC58354.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
conserved exported hypothetical protein
H3-18-all-fractions_k255_4857172_5
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3611..4564
DNA (954bp) protein (318aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
prsA; ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
ribose-phosphate pyrophosphokinase n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036D0F4C
H3-18-all-fractions_k255_4857172_6
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4678..5295)
DNA (618bp) protein (206aa)
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|SAAS:SAAS00106234}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00178};; Short=Lumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178};; EC=2.5.1.78 {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|SAAS:SAAS00106234};; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
ribH; riboflavin synthase subunit beta (EC:2.5.1.9)
riboflavin synthase subunit beta n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002E2C1E7
H3-18-all-fractions_k255_4857172_7
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5982..6482
DNA (501bp) protein (167aa)
DNA primase/helicase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IHM1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KJC58344.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
hypothetical protein
H3-18-all-fractions_k255_4857172_8
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6660..7511
DNA (852bp) protein (284aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=1355477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens.;"
proC; pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Delta 1-pyrroline-5-carboxylate reductase n=2 Tax=Bradyrhizobium RepID=Q89DI5_BRADU
H3-18-all-fractions_k255_4857172_9
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7639..8034)
DNA (396bp) protein (132aa)
Bll7455 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89DI4_BRADU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGJ63837.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
H3-18-all-fractions_k255_4857172_10
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8180..8392)
DNA (213bp) protein (71aa)
Uncharacterized protein, 4-oxalocrotonate tautomerase n=2 Tax=Bradyrhizobium RepID=H5YA89_9BRAD
Tautomerase {ECO:0000313|EMBL:KJC44930.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
hypothetical protein
H3-18-all-fractions_k255_4857172_11
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(8539..10011)
DNA (1473bp) protein (491aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
histidyl-tRNA synthase n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002F55BBE
hisS; histidyl-tRNA synthetase
H3-18-all-fractions_k255_4857172_12
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10203..11093)
DNA (891bp) protein (297aa)
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:KJC58339.1}; EC=2.6.1.42 {ECO:0000313|EMBL:KJC58339.1};; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
Branched-chain amino acid aminotransferase n=1 Tax=Rhodovulum sp. PH10 RepID=J6UJ94_9RHOB
branched-chain amino acid aminotransferase
H3-18-all-fractions_k255_4857172_13
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11484..11954
DNA (471bp) protein (157aa)
MarR family transcriptional regulator n=1 Tax=Bradyrhizobium elkanii RepID=UPI00037FB954
Uncharacterized protein {ECO:0000313|EMBL:ERF83214.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
MarR family transcriptional regulator
H3-18-all-fractions_k255_4857172_14
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11957..12703
DNA (747bp) protein (249aa)
chemotaxis protein CheY n=1 Tax=Bradyrhizobium elkanii RepID=UPI000381E185
Two-component system, OmpR family, phosphate regulon response regulator OmpR {ECO:0000313|EMBL:ERF83213.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
two-component response regulator
H3-18-all-fractions_k255_4857172_15
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12714..14099
DNA (1386bp) protein (462aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
ATPase n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002FA08B0
putative two-component sensor histidine kinase
H3-18-all-fractions_k255_4857172_16
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14184..14483)
DNA (300bp) protein (100aa)
Butyryl-CoA dehydrogenase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IKU2_9BRAD
Signal peptide protein {ECO:0000313|EMBL:KJC44925.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
hypothetical protein
H3-18-all-fractions_k255_4857172_17
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14647..15105
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00031070B1
Signal peptide protein {ECO:0000313|EMBL:KJC44924.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
hypothetical protein
H3-18-all-fractions_k255_4857172_18
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15226..15909
DNA (684bp) protein (228aa)
Icc protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H0G1_9BRAD
Ribonuclease T {ECO:0000313|EMBL:KJC58335.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
ribonuclease
H3-18-all-fractions_k255_4857172_19
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16095..16955
DNA (861bp) protein (287aa)
Ribosomal RNA large subunit methyltransferase J {ECO:0000256|HAMAP-Rule:MF_00934}; EC=2.1.1.266 {ECO:0000256|HAMAP-Rule:MF_00934};; 23S rRNA (adenine(2030)-N6)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00934}; 23S rRNA m6A2030 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00934}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
lactate dehydrogenase n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002E38DCB
hypothetical protein
H3-18-all-fractions_k255_4857172_20
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17213..17428
DNA (216bp) protein (72aa)
Cold shock protein (Beta-ribbon, CspA family) n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IHK7_9BRAD
Cold-shock protein {ECO:0000313|EMBL:KJC44921.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
cspA; DNA binding cold shock protein
H3-18-all-fractions_k255_4857172_21
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(17500..18339)
DNA (840bp) protein (280aa)
S-adenosyl-L-methionine-dependent methyltransferase {ECO:0000256|RuleBase:RU362030}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362030};; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
methyltransferase n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI000346D38F
methyltransferase
H3-18-all-fractions_k255_4857172_22
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18441..19073)
DNA (633bp) protein (211aa)
membrane protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI0003605721
Membrane protein {ECO:0000313|EMBL:KJC44920.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
outer-membrane immunogenic protein
H3-18-all-fractions_k255_4857172_23
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19329..20360
DNA (1032bp) protein (344aa)
excinuclease ABC subunit C n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002DA13EF
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
excinuclease ABC subunit C
Displaying 23 items

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