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S1-16-all-fractions_k255_1935066_18

Organism: S1-16-all-fractions_metab_52

near complete RP 43 / 55 MC: 4 BSCG 42 / 51 MC: 10 ASCG 14 / 38 MC: 2
Location: comp(14418..15008)

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimM n=1 Tax=Nocardioides sp. CF8 RepID=R7XVH0_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 72.7
  • Coverage: 183.0
  • Bit_score: 271
  • Evalue 4.40e-70
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.7
  • Coverage: 183.0
  • Bit_score: 271
  • Evalue 6.20e-70
16S rRNA processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 70.9
  • Coverage: 182.0
  • Bit_score: 261
  • Evalue 9.90e-68

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Taxonomy

Nocardioides sp. CF8 → Nocardioides → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 591
GTGAGCGATCAGCAACAGGGCGACATCGAGGTCGTGGTCGGCCGGATCGGCAAGCCCCACGGCATCCGCGGCGAGGTCACGCTCGACGTACGCACCGACGAGCCCGACCGGCGCTTCGCCCCCGGCACCACGATGCGCGCCCAGGCGCCCGCCGGTGCCGACCGCCGCCCCGCCACGCTCACCGTGACCCGTGCTCGCTGGCACCAGAGCACGCTGCTGGTCACCTTCGAGGAGCTGACCGACCGCAATGCCGCCGAGGCCGTTCGCGGCACCGTCCTCTACGCCACGCTGGGGCACGACGAGACGCCCGAGGACCCCGACGAGTTCTACGACCACCAGCTGATCGGGCTCGCCGTCGTCGACGTGGACGGTACGCCGCTGGGCGAGGTGAAGGCCGTCGTGCACGGCTCGGCGCAGGACCTGCTCACCGTGCGCACGCCCGACGGACGCGACACCCTCGTGCCGTTCGTCGCCGCGCTCGTGCCCGAGGTCGACCTCGAGGCGGGCCGTGTGGTGGTCGCCGACCGCCCGGGCCTGGTCTCGCCCTTTCCGGAGGACCTTCCGGACGAGCCCGCCGAGGACCCGCGGTGA
PROTEIN sequence
Length: 197
VSDQQQGDIEVVVGRIGKPHGIRGEVTLDVRTDEPDRRFAPGTTMRAQAPAGADRRPATLTVTRARWHQSTLLVTFEELTDRNAAEAVRGTVLYATLGHDETPEDPDEFYDHQLIGLAVVDVDGTPLGEVKAVVHGSAQDLLTVRTPDGRDTLVPFVAALVPEVDLEAGRVVVADRPGLVSPFPEDLPDEPAEDPR*