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S1-16-all-fractions_k255_1935066

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Displaying 23 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1-16-all-fractions_k255_1935066_1
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..162)
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XWD8_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EON23290.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
hypothetical protein
S1-16-all-fractions_k255_1935066_2
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(382..945)
DNA (564bp) protein (188aa)
Phosphoglycerate mutase n=1 Tax=Nocardioides sp. CF8 RepID=R7XVG9_9ACTO
Phosphoglycerate mutase {ECO:0000313|EMBL:EON23291.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
hypothetical protein
S1-16-all-fractions_k255_1935066_3
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(955..1857)
DNA (903bp) protein (301aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
Phosphatidate cytidylyltransferase n=1 Tax=Nocardioides sp. CF8 RepID=R7XVF6_9ACTO
phosphatidate cytidylyltransferase
S1-16-all-fractions_k255_1935066_4
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1869..2411)
DNA (543bp) protein (181aa)
Ribosome-recycling factor n=1 Tax=Nocardioides sp. CF8 RepID=R7XVD6_9ACTO
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
ribosome-recycling factor
S1-16-all-fractions_k255_1935066_5
Propionibacterium acnes, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2476..3192)
DNA (717bp) protein (239aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=1051006 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium acnes SK182B-JCVI.;"
pyrH; uridylate kinase (EC:2.7.4.22)
Uridylate kinase n=1 Tax=Propionibacterium acnes SK182B-JCVI RepID=F9NS73_PROAA
S1-16-all-fractions_k255_1935066_6
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3388..4200)
DNA (813bp) protein (271aa)
Elongation factor Ts n=1 Tax=Nocardioides sp. CF8 RepID=R7XVH3_9ACTO
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
elongation factor Ts
S1-16-all-fractions_k255_1935066_7
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(4328..5353)
DNA (1026bp) protein (342aa)
30S ribosomal protein S2 n=1 Tax=Nocardioides sp. CF8 RepID=R7XVC3_9ACTO
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
30S ribosomal protein S2P
S1-16-all-fractions_k255_1935066_8
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5800..6375
DNA (576bp) protein (192aa)
Peptidase M23B n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SLR1_NOCSJ
peptidase M23B
Peptidase M23B {ECO:0000313|EMBL:ABL82746.1}; Flags: Precursor;; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
S1-16-all-fractions_k255_1935066_9
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6407..7345)
DNA (939bp) protein (313aa)
Tyrosine recombinase XerC n=1 Tax=Nocardioides sp. CF8 RepID=R7XVE2_9ACTO
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
phage integrase family protein
S1-16-all-fractions_k255_1935066_10
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7374..8561)
DNA (1188bp) protein (396aa)
DNA protecting protein DprA n=1 Tax=Nocardioides sp. CF8 RepID=R7XWE8_9ACTO
DNA protecting protein DprA {ECO:0000313|EMBL:EON23300.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
DNA protecting protein DprA
S1-16-all-fractions_k255_1935066_11
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8558..10162)
DNA (1605bp) protein (535aa)
Mg chelatase, subunit ChlI n=1 Tax=Nocardioides sp. CF8 RepID=R7XVH8_9ACTO
Mg chelatase, subunit ChlI {ECO:0000313|EMBL:EON23301.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
Mg chelatase subunit ChlI
S1-16-all-fractions_k255_1935066_12
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10162..10560)
DNA (399bp) protein (133aa)
UPF0102 protein CF8_2845 n=1 Tax=Nocardioides sp. CF8 RepID=R7XVD2_9ACTO
UPF0102 protein CF8_2845 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
hypothetical protein
S1-16-all-fractions_k255_1935066_13
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10738..11046)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SLR9_NOCSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL82754.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
S1-16-all-fractions_k255_1935066_14
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11043..11831)
DNA (789bp) protein (263aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
Ribonuclease HII n=1 Tax=Nocardioides sp. CF8 RepID=R7XVE6_9ACTO
ribonuclease HII
S1-16-all-fractions_k255_1935066_15
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11843..12571)
DNA (729bp) protein (243aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
signal peptidase I (EC:3.4.21.89)
Signal peptidase I n=1 Tax=Nocardioides sp. CF8 RepID=R7XWF3_9ACTO
S1-16-all-fractions_k255_1935066_16
Nocardioidaceae bacterium Broad-1, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(12720..13070)
DNA (351bp) protein (117aa)
50S ribosomal protein L19 n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9V207_9ACTO
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=408672 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;"
rplS; 50S ribosomal protein L19
S1-16-all-fractions_k255_1935066_17
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13255..14421)
DNA (1167bp) protein (389aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|SAAS:SAAS00014918}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|SAAS:SAAS00014917};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Nocardioides sp. CF8 RepID=R7XVD7_9ACTO
transposon TnsE
S1-16-all-fractions_k255_1935066_18
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14418..15008)
DNA (591bp) protein (197aa)
Ribosome maturation factor RimM n=1 Tax=Nocardioides sp. CF8 RepID=R7XVH0_9ACTO
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
16S rRNA processing protein RimM
S1-16-all-fractions_k255_1935066_19
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15230..15472)
DNA (243bp) protein (81aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI00037F96AD
hypothetical protein
UPF0109 protein Noca_3259 {ECO:0000256|HAMAP-Rule:MF_00088}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
S1-16-all-fractions_k255_1935066_20
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(15478..16038)
DNA (561bp) protein (187aa)
30S ribosomal protein S16 n=1 Tax=Nocardioides sp. CF8 RepID=R7XWF6_9ACTO
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
30S ribosomal protein S16
S1-16-all-fractions_k255_1935066_21
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16231..16887)
DNA (657bp) protein (219aa)
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI000380EDD7
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ABL82760.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
S1-16-all-fractions_k255_1935066_22
Nocardioides luteus, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16979..17857
DNA (879bp) protein (293aa)
vancomycin resistance protein n=1 Tax=Aestuariimicrobium kwangyangense RepID=UPI0003B76DD3
Vancomycin resistance protein {ECO:0000313|EMBL:KJR06382.1}; TaxID=1844 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides luteus.;"
VanW family protein
S1-16-all-fractions_k255_1935066_23
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18003..18401
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XVE0_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EON23312.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
Displaying 23 items

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