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S1-16-all-fractions_k255_6700223_1

Organism: S1-16-all-fractions_metab_52

near complete RP 43 / 55 MC: 4 BSCG 42 / 51 MC: 10 ASCG 14 / 38 MC: 2
Location: 1..1560

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.4
  • Coverage: 500.0
  • Bit_score: 788
  • Evalue 3.10e-225
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Nocardioides sp. CF8 RepID=R7XW85_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 82.4
  • Coverage: 500.0
  • Bit_score: 788
  • Evalue 2.20e-225
MiaB-like tRNA modifying enzyme YliG similarity KEGG
DB: KEGG
  • Identity: 74.6
  • Coverage: 496.0
  • Bit_score: 689
  • Evalue 5.10e-196

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Taxonomy

Nocardioides sp. CF8 → Nocardioides → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1560
CGGTCGCGCACGGCCGACTACGATGGGCCGGTGACAGCTCCGCCCCGCCCTGCCCAGACGCCCGGGGCAGCAGCCTCCGGGTCCGCTCCGGACAGGCGCACGGTGGCGATGGTCACCCTCGGCTGCGCGCGCAACGAGGTGGACTCCGAGGAGCTGGCCGGACGCCTCGAGGCAGGTGGGTTCGTGCTGGTGGCCGATGCCGAGGACGCCGACACGGTCCTGGTCAACACGTGCGGCTTCGTCGAGGCGGCCAAGAAGGACTCCGTCGACACCCTCCTGGAGGCCGCGGACCTCAAGGCCTCGGCCGGGCACGGTGGGCGCGCGCAGGCCGTCGTCGCCGTCGGGTGCCTCGCGGAGAGGTACGGCAAGGACCTCGCCGACTCGCTGCCCGAGGCCGACGCGGTCCTCGGCTTCGACGACTACCCCGACATCGCCGCCAAGCTGCGCTCGATCGTGGCGGGGGAGACCCACCACCCCCACACGCCGTCCGACCGCCGCCGGCTGCTGCCGATCTCGCCCGTCGACCGGGACGCCTCGGCGATCTCCATCCCCGGACACCAGGCCGATGTGGCCGACATCGCGGACGTCAGCGAGATCGGCGCCGGTGCGCCGGCCACGGGTCCGCGCGCCGTACGCCGTCGCCTCGACGCCGGTCCGATGGCCCCGCTCAAGCTGGCCAGCGGGTGCGACCGGCGTTGCTCCTTCTGCGCGATCCCCAGCTTCCGCGGCTCGTTCGTGAGCCGCCGCCCCAGCGACGTCGTCGGCGAGGCACGCTGGCTCGCCGCCGAGGGCGTCAAGGAGCTGTTCCTCGTCAGCGAGAACTCCACGTCCTACGGCAAGGACCTCGGCGACCTCCGTCTCCTCGAGACGCTGCTGCCCGAGCTCTCCGGCATCGACGGCATCGAGCGGGTCCGGGTCTCCTACCTCCAGCCCGCCGAGACCCGGCCGGGCCTCATCGAGGCGATCGCGTCGACGCCGGGCGTCGTGCCCTACTTCGACCTGTCGTTCCAGCACGCGAGCGCGACCGTGCTGCGCCGGATGCGCCGCTTCGGTGACCCCGAGAGCTTCCTCGACCTCCTCGAGCGGATCCGTACGCTGGCCCCGCTGGCCGGCGTACGGTCCAACGTCATCGTCGGGTTCCCGGGCGAGACGGACGACGACCTCCAGGTCCTCTGCGACTTCCTCGAGGCGGCCCGCATGGACGTCACCGGCGTGTTCGGCTACTCCGACGAGGACGGCACCGAGGCGGCCGGCTTCGGCGACGACCTCAAGCTGGACGACGACGAGATCCGCGCCCGCACCGAGCACGTCACGGCCCTCGTCGAGGAGCTCAACGCCCAGCGGGCTGAGGAGCGGATCGGCGAGGAGGTCGTCGTGCTCGTCGAGTCGGTCGACGAGGACGGCACCGTGGGCCGCGCCGCCCACCAGGGCCCCGAGGTGGACGGTACGACGTTGCTGGCGGACGCGCGGCACGCCCGGATCGGTGACCTGCTGACCGCAACGGTCACCGGCACCGACGGCGTCGACCTGATCGCGCGAGTGGACGGAGCCACCGGATGA
PROTEIN sequence
Length: 520
RSRTADYDGPVTAPPRPAQTPGAAASGSAPDRRTVAMVTLGCARNEVDSEELAGRLEAGGFVLVADAEDADTVLVNTCGFVEAAKKDSVDTLLEAADLKASAGHGGRAQAVVAVGCLAERYGKDLADSLPEADAVLGFDDYPDIAAKLRSIVAGETHHPHTPSDRRRLLPISPVDRDASAISIPGHQADVADIADVSEIGAGAPATGPRAVRRRLDAGPMAPLKLASGCDRRCSFCAIPSFRGSFVSRRPSDVVGEARWLAAEGVKELFLVSENSTSYGKDLGDLRLLETLLPELSGIDGIERVRVSYLQPAETRPGLIEAIASTPGVVPYFDLSFQHASATVLRRMRRFGDPESFLDLLERIRTLAPLAGVRSNVIVGFPGETDDDLQVLCDFLEAARMDVTGVFGYSDEDGTEAAGFGDDLKLDDDEIRARTEHVTALVEELNAQRAEERIGEEVVVLVESVDEDGTVGRAAHQGPEVDGTTLLADARHARIGDLLTATVTGTDGVDLIARVDGATG*