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S1-16-all-fractions_k255_6700223

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1-16-all-fractions_k255_6700223_1
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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1..1560
DNA (1560bp) protein (520aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Nocardioides sp. CF8 RepID=R7XW85_9ACTO
MiaB-like tRNA modifying enzyme YliG
S1-16-all-fractions_k255_6700223_2
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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1557..2192
DNA (636bp) protein (212aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
CDP-diacylglycerol--glycerol-3-phosphate n=1 Tax=Nocardioides sp. CF8 RepID=R7XX67_9ACTO
CDP-diacylglycerol--glycerol-3-phosphate {ECO:0000313|EMBL:EON23600.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
S1-16-all-fractions_k255_6700223_3
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2313..4640
DNA (2328bp) protein (776aa)
5'-nucleotidase (EC:3.1.3.5)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037612E1
5'-nucleotidase {ECO:0000313|EMBL:EWT05463.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
S1-16-all-fractions_k255_6700223_4
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(4724..6490)
DNA (1767bp) protein (589aa)
Glycoside hydrolase 15 n=1 Tax=Nocardioides sp. CF8 RepID=R7XWA7_9ACTO
Glycoside hydrolase 15 {ECO:0000313|EMBL:EON23603.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
glycoside hydrolase 15-like protein
S1-16-all-fractions_k255_6700223_5
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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6509..7033
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI00036E9089
Competence/damage-inducible protein cinA {ECO:0000313|EMBL:EON23604.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
competence/damage-inducible protein cinA
S1-16-all-fractions_k255_6700223_6
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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7080..7391
DNA (312bp) protein (104aa)
Helix-turn-helix domain-containing protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XX72_9ACTO
Helix-turn-helix domain-containing protein {ECO:0000313|EMBL:EON23605.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
DNA-binding protein
S1-16-all-fractions_k255_6700223_7
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7445..8236)
DNA (792bp) protein (264aa)
Formamidopyrimidine-DNA glycolase n=1 Tax=Nocardioides sp. CF8 RepID=R7XWB8_9ACTO
Formamidopyrimidine-DNA glycolase {ECO:0000313|EMBL:EON23606.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
formamidopyrimidine-DNA glycosylase
S1-16-all-fractions_k255_6700223_8
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8229..12761)
DNA (4533bp) protein (1511aa)
DEAD/DEAH box helicase domain-containing n=1 Tax=Nocardioides sp. CF8 RepID=R7XW76_9ACTO
DEAD/DEAH box helicase domain-containing {ECO:0000313|EMBL:EON23607.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
DEAD/DEAH box helicase
S1-16-all-fractions_k255_6700223_9
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(12799..13995)
DNA (1197bp) protein (399aa)
Glycosyl transferase group 1 n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CAT4_SPHTD
glycosyl transferase group 1
Glycosyl transferase group 1 {ECO:0000313|EMBL:ACZ39881.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
S1-16-all-fractions_k255_6700223_10
unknown

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comp(14201..14452)
DNA (252bp) protein (84aa)

This feature has no annotations

S1-16-all-fractions_k255_6700223_11
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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14686..15807
DNA (1122bp) protein (374aa)
rsbT; switch protein/serine-threonine kinase; controls the activity of the piezosome (stressosome) (EC:2.7.11.1)
Switch protein/serine-threonine kinase controls the activity of the piezosome (Stressosome) {ECO:0000313|EMBL:CCH87352.1}; EC=2.7.11.1 {ECO:0000313|EMBL:CCH87352.1};; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
Switch protein/serine-threonine kinase controls the activity of the piezosome (Stressosome) n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4EVD9_MODMB
S1-16-all-fractions_k255_6700223_12
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15810..15977
DNA (168bp) protein (56aa)
anti-anti-sigma factor n=1 Tax=Smaragdicoccus niigatensis RepID=UPI000373B8FE
rsbR; RsbT co-antagonist protein rsbRA
RsbT co-antagonist protein rsbRA {ECO:0000313|EMBL:CCH87353.1}; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
Displaying 12 items

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