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S1-16-all-fractions_k255_5528114_18

Organism: S1-16-all-fractions_metab_52

near complete RP 43 / 55 MC: 4 BSCG 42 / 51 MC: 10 ASCG 14 / 38 MC: 2
Location: comp(13437..14453)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 96.1
  • Coverage: 337.0
  • Bit_score: 636
  • Evalue 4.40e-180
DNA-directed RNA polymerase subunit alpha {ECO:0000255|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000255|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000255|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000255|HAMAP-Rule:MF_00059}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.1
  • Coverage: 337.0
  • Bit_score: 636
  • Evalue 2.20e-179
DNA-directed RNA polymerase subunit alpha n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=RPOA_NOCSJ similarity UNIREF
DB: UNIREF100
  • Identity: 96.1
  • Coverage: 337.0
  • Bit_score: 636
  • Evalue 1.50e-179

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Taxonomy

Nocardioides sp. JS614 → Nocardioides → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1017
GTGCTCATCGCTCAGCGCCCGACCCTCACGGAAGAGACCGTCGACGAGTTCCGCTCGCGGTTCGTCATCGAGCCCCTCGAGCCCGGCTTCGGCTACACGCTCGGCAACTCGCTCCGTCGTACGCTCCTCAGCTCGATCCCGGGTGCCTCGGTCACCAGCATCAAGGTCGACTCCGTCCTCCACGAGTTCTCGACCATCGAGGGCGTCACCGAGGACATGACCGAGATCATCCTCAACCTCAAGGGCATCGTCGTCTCCTCCGAGCACGACGAGCCCGTCGTGATGTACCTGCGCAAGTCGGGTGCCGGTGACGTCACCGCCGCCGACATCACGCCGCCCGCCGGCGTCGAGGTCCACAACCCCGAGCTGAAGATCGCCACGCTCTCCGACAAGGGCAAGCTGGAGATGGAGCTCGTCGTGGAGCGTGGCCGCGGCTACGTCTCCTCGGTGCAGAACAAGGGTGCCGACAACGAGATCGGCCGCATGCCGGTCGACTCGATCTACAGCCCCGTGCTGAAGGTGACCTACAAGGTCGAGGCCACCCGAGTCGAGCAGCGCACCGACTTCGACAAGCTCGTCATCGACGTCGAGACCAAGCCCTCGATCCGTCCCCGCGACGCGATCGCCTCGGCCGGCAAGACGCTCGTCGAGCTGTTCGGCCTGGCCCGCGAGCTCAACGTCGAGGCCGAGGGCATCGACATCGGCCCGTCGCCCGTCGACGAGCAGCTCGCCGCCGACCTGGCCCTGCCGGTCGAGGACCTGCAGCTCACGGTCCGCAGCTACAACTGCCTCAAGCGCGAGGGCATCCACACCGTGGGTGAGCTCATCTCCCGCTCGGAGCAGGACCTGCTCGACATCCGCAACTTCGGCGCCAAGTCGATCGACGAGGTCAAGGCCAAGCTGCACGAGATGGGTCTCTCGCTCAAGGACAGCGCGCCCGGCTTCGACCCGCACGCCGCCCTCGCCGCCTACGGCGACGATGACGACGATGCTTTCATCGAGGACGAACAACTCTGA
PROTEIN sequence
Length: 339
VLIAQRPTLTEETVDEFRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGASVTSIKVDSVLHEFSTIEGVTEDMTEIILNLKGIVVSSEHDEPVVMYLRKSGAGDVTAADITPPAGVEVHNPELKIATLSDKGKLEMELVVERGRGYVSSVQNKGADNEIGRMPVDSIYSPVLKVTYKVEATRVEQRTDFDKLVIDVETKPSIRPRDAIASAGKTLVELFGLARELNVEAEGIDIGPSPVDEQLAADLALPVEDLQLTVRSYNCLKREGIHTVGELISRSEQDLLDIRNFGAKSIDEVKAKLHEMGLSLKDSAPGFDPHAALAAYGDDDDDAFIEDEQL*