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FFSP_072018_bottom_0_1um_scaffold_2320_5

Organism: FFSP_072018_bottom_0_1um_Hydrogenophilales_64_54

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: 3294..5357

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.4
  • Coverage: 700.0
  • Bit_score: 1128
  • Evalue 0.0
RNAse E (EC:3.1.4.-) similarity KEGG
DB: KEGG
  • Identity: 84.4
  • Coverage: 700.0
  • Bit_score: 1128
  • Evalue 0.0
ribonuclease E n=1 Tax=Thiobacillus thioparus RepID=UPI00036E0F99 similarity UNIREF
DB: UNIREF100
  • Identity: 86.9
  • Coverage: 681.0
  • Bit_score: 1152
  • Evalue 0.0

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2064
ATGAAGCGCATGCTATTCAACGCAACCCAGGCGGAAGAACTCCGGGTTGCCATCGTCGACGGCCAGAAACTCGTCGACCTTGACATCGAGTCCGCCAGCAAGGAACAACGCAAGGGCAATATCTACAAAGGTGTCGTCACCCGCGTCGAGCCCAGTCTGGAAGCCGCATTCGTCGACTACGGCTGCGAACGCCACGGTTTTCTGCCATTCAAGGAAATTGCACGCGCCTGTCTGCCCAACGGCGGCAAGGTTCCCGAAAACCTGAAAGAAGGCCAGGAACTGCTGGTCCAGGTGGAAAAGGACGAGCGCGGCAACAAGGGCGCCGCCCTCACTACCTACGTCTCGCTGGCCGGCCGTTTCGTCGTCTTGATGCCGACCAACCCGCGCGGCGGCGGCGTCTCGCGCCGCATCGAAGGCGAGGAGCGCAACGAACTGCGCGACACCCTGGCCCAGCTCGATATCCCCGAAGGCATGAGCCTGATCGCCCGCACCGCCGGCATCGGCCGCACCGTCGAGGAATTCCAATGGGACCTGAACTATCTCTTGAGCCTGTGGAAAGCCATCGACGGCGCGTCTGACATGCAAAAAGGCGCCTTCCTGATCTACCAGGAAGGCAGCCTGGTGATCCGCGCCATCCGTGACTACTTCTCGGCCGATATCGGCGAGATCCTGATCGACACCGAAGACATCTACGAGCAGGCGCAGCAGTTCATGGCGCACGTGATGCCGGACAACGTCGACAAGGTCAAGCTCTACCGCGACGATGTGCCGCTGTTCTCGCGCTTCCAGATCGAACACCAGATCGAATCGGCGTATTCGCGCCAGGTCAACCTGCCGGCCGGCGGTGCGATCGTGATCGACCACACCGAGGCGCTGGTCTCGGTCGATGTCAACTCGGCGCGCGCCACCAAGGGCAGCGACGTCGAGCAGACCGCCTACAACACCAACCTCGAAGCGGCCGACGAAATCGCCCGCCAGATGCGTCTGCGCGACCTCGGCGGCCTGATCGTGATCGACTTCATCGACATGGAAGAGCCCAAGCATCAGCGCGAAGTCGAAAACCGCCTGCGCGATGCCCTGCATCACGACCGCGCCCGCGTGCAGACCGGCAAGATCTCGCGCTTCGGCCTGCTGGAAATGTCGCGTCAGCGGCTGCAGCCCTCGCTCGGCGAGACCAGCTACACGCCCTGCCCGCGCTGCCACGGCACCGGCCATATCCGCGGCGCCGAGTCGTCCGCGCTGCACATCCTGCGCATCCTGCAGGAAGAGGCGATGAAGGAAAACACCGGCGCGCTGCACGTTCAATTGCCGGTCGACGTCGCCACTTTCCTGCTGAACGAGAAGCGCATCGACATTCACACCCTCGAAACGCGCCTCAAGGTGAACGTGGTATTGATCCCCAACGTCCACCTGGAAACCCCGCACTACGCCATCACCCGGCTGCGCCACGACGAGCTCAACCTGCGCGAGGCGGCCGAGTCGAGCTACAAGCTGGTGGCTATGCCGGAACCCGGGGCCATTTATCAGACCGCGCAAGAAGCCGCTCCGGCCCGCCAGATCGCCGCAGTCAAGTCGATTGCCCCGCCGCCGCAACCGGTACCCGCAGCGCGGCCGGCCGTTGCGGACGCACCGCAGCCGCAGCCGCAGCTCGGCCTGTTCGGGCGCATTTTCGGCTGGTTCAAAAAACAGGGTGAAGAAGCACCCACAGCCGCACCCGAGCCGGTTCCCGCCCTCACTCAACGCCCGAGTGAACGGCGTGACCGTGACCGCAAGCCCGGCCAGCGTCGCGGCCGCGGCGAAGGACGTAGCGGCGAAGCACGTAGCGGCGAAGCACGTGGCGAAGCACGCCCGAATGAGCCGCGTCAGGCTGCACCGCGCGAGGGTCGCGAGGGTCGCGAGGCACGAGGCAGCGAACAGCCCAAACAGCCGCGTCCGCCGCGTCAGCCCAAACCGCGCCCCGAAGCCGAAACTGCACCGCAGGTCGCGGAGCCGGTCGAAGCGCTGCATGAACCCGGCGCCCAAGGCGGCCCGCGTGCCGGCCGCGCCCAAGCAGCAGGCATTTGA
PROTEIN sequence
Length: 688
MKRMLFNATQAEELRVAIVDGQKLVDLDIESASKEQRKGNIYKGVVTRVEPSLEAAFVDYGCERHGFLPFKEIARACLPNGGKVPENLKEGQELLVQVEKDERGNKGAALTTYVSLAGRFVVLMPTNPRGGGVSRRIEGEERNELRDTLAQLDIPEGMSLIARTAGIGRTVEEFQWDLNYLLSLWKAIDGASDMQKGAFLIYQEGSLVIRAIRDYFSADIGEILIDTEDIYEQAQQFMAHVMPDNVDKVKLYRDDVPLFSRFQIEHQIESAYSRQVNLPAGGAIVIDHTEALVSVDVNSARATKGSDVEQTAYNTNLEAADEIARQMRLRDLGGLIVIDFIDMEEPKHQREVENRLRDALHHDRARVQTGKISRFGLLEMSRQRLQPSLGETSYTPCPRCHGTGHIRGAESSALHILRILQEEAMKENTGALHVQLPVDVATFLLNEKRIDIHTLETRLKVNVVLIPNVHLETPHYAITRLRHDELNLREAAESSYKLVAMPEPGAIYQTAQEAAPARQIAAVKSIAPPPQPVPAARPAVADAPQPQPQLGLFGRIFGWFKKQGEEAPTAAPEPVPALTQRPSERRDRDRKPGQRRGRGEGRSGEARSGEARGEARPNEPRQAAPREGREGREARGSEQPKQPRPPRQPKPRPEAETAPQVAEPVEALHEPGAQGGPRAGRAQAAGI*