ggKbase home page

FFSP_072018_bottom_0_1um_scaffold_2320_16

Organism: FFSP_072018_bottom_0_1um_Hydrogenophilales_64_54

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: comp(15989..16096)

Top 3 Functional Annotations

Value Algorithm Source
Integrase core domain-containing protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XLG7_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 79.4
  • Coverage: 34.0
  • Bit_score: 62
  • Evalue 7.30e-08
integrase core domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 79.4
  • Coverage: 34.0
  • Bit_score: 62
  • Evalue 2.10e-08
Integrase core domain-containing protein {ECO:0000313|EMBL:AGU53303.1}; Putative transposase {ECO:0000313|EMBL:AGU52980.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.4
  • Coverage: 34.0
  • Bit_score: 62
  • Evalue 1.00e-07

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 108
AATACCCGCAACTGGTCACCCATCGGCGCCGTGACGCTGAACCCCGAACGCGACTGCATCATCAAGTCGCATTTGGCCGGCAACAATATTCAGCCGTTGGCTGCATGA
PROTEIN sequence
Length: 36
NTRNWSPIGAVTLNPERDCIIKSHLAGNNIQPLAA*