ggKbase home page

FFSP_072018_bottom_0_1um_scaffold_327_5

Organism: FFSP_072018_bottom_0_1um_Hydrogenophilales_65_12

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 3 ASCG 13 / 38 MC: 3
Location: comp(2491..5232)

Top 3 Functional Annotations

Value Algorithm Source
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) id=1333626 bin=GWE1_T_denit_62_9 species=Nitrosococcus watsonii genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb similarity UNIREF
DB: UNIREF100
  • Identity: 78.7
  • Coverage: 917.0
  • Bit_score: 1435
  • Evalue 0.0
PAS/PAC sensor(s)-containing diguanylate cyclase/phosphodiesterase similarity KEGG
DB: KEGG
  • Identity: 36.3
  • Coverage: 772.0
  • Bit_score: 434
  • Evalue 6.80e-119
Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 79.7
  • Coverage: 883.0
  • Bit_score: 1401
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2742
ATGCGACTCACGCAACTGGATACCCAGGCGCGGATCCTTAGCGCGCTCGCGCTGGTCGTGGTGATCGTGGTCGTGCTCGCAGGCCAGCAGGCGCTGCAGGCTGCCCGCCAGAATGTCGACGCGGCGCTGCGCGAGGTCGCCGAAACGCAATTCGCCAGCCTGTCGCAGGCGGTGACCGATGCGGCCATCCTGCGCGACCACTATGCCCTGCAAGCCCATCTCGAAGTCCCGGTCGCGCGCGGCATCCTGCGTTATGCGGAATATACGGCACCCGATGGGCACGTGCTGAGACGGGACGCCGGCATGCAGCGCGTCGAACGGCCGGACTGGTTTGCCGCGCTGGCCCGGCTGGAACCGCCCCACCTGCAGGCGAACATCGTCATCGGCGGCACCGATTACGGGCACCTGGCCCTGCAGCCGTCGCCCCACGTGCGCGAGGATTTTCTGTGGCACCTGGTCACCCGGTTGTTCTTACTGCTGGCGGGGGCGTTCGCCCTGCTCGGCTGGCTGACACGCGCCCTGCTGCGGACCAACCTGCAGGACCTGACGCGGCTGCGCGCCGCCGCGCGGCGGATCGAGACCGGCGACTACCGCACGCGCATCCCGATCCGCCCCGGCAGCCCACCCGAACTGCGCGAGACCACGCAGGCGTTCAATCACATGAGCGCCGCGCTGGAACAGCTGCTGGCCAACCTCAACGAGCAGCAGGCCGCGCTCGATCATACCGCCTGCATTTCCGAGACCGACCTCGCCGGCAACATCACCTACGTCAACGACCTGTTCTGCGCCATCAGCGGTTTCAACCGCGAGGAGCTGATCGGCCGCAATCACCGCATCGTCAACGCGGGGCATCACGTGGCCGCCTTCTTCGACGAACTGTGGACCACCATCGGCCGCGGCCGCACCTGGCGCGGCGAAATGTGCAGCCGCGCCCGCGACGGCCGGCTGTTCTGGACCGCCACCACCATCATTCCGATCAAGGACGACGACGGCCTGCCGTCCAAATATCTGTCGATCCGCTTCGACATCACGCAGCGCAAGCTGGACGAGGCCGCGCTCAGCGCGGAAAAGGAACGCTGGCAGGTGACGCTGCAGTCGATCAACGATGCCGTCATCGTGACGCAGGCCGACAGCCGCGTGGCCTACATCAACCCGGCGGCCGAACACCTGCTCGGGATTGCGCTCGAGGAAGCGACATCGATTCCGCTGAAGCATCTGATGCAATTCGACCAGATCAAGAGCGAAGACGAGGGCCCGACGTGCTTCCTCTCGCCCGCCTCGGCACCGCGGGGCCAAACCGGCTCGGTTCGCCTGCACACCCGGCAGGGCCAGGCGCTGGCCATCAGCTACAGCTGCGCGCCGCTCGGCGCGCACGGCGGGGTCGGCGCGGTCTATGTGCTGCGCGACGAAACCGAGAAAAAACAGCTGCTCGACAGCCTGCGTGAAATGGCCTTCCACGACCCGCTGACCGCATTGCCGAACCGGCGCGCGGTGGAAGGCCGGCTCGACCGCGCCATGCGCATTGCGCGCGAAGACGCGCAGCAGCATGCGTTCTGCTACATCGATCTCGACCAGTTCAAGCTCGTCAACGACACCTGCGGCCACTCGGTGGGCGACAGCCTGCTGAAGAACATCGCGCAGGCCATGAAGGAAGCCCTGCCCGAGCAGGCCTACCTGGGCCGACTCGGCGGCGACGAATTCGGCCTGATCCTGTTTGATACCCGCACCCAGGACGCGATCGAAATCTGCCGGCAACTGGTGCAGCGCATCCGCGATTACCGCTTCGAGCACAACGGGCGGCGCTTCGCCCTCGGCGCCTGCGCCGGCATTGCGCCCATCACCGCGGCCGCCGCGACGACCAGCGGCATCATGATCCAGGCGGACATGGCCTGTTACCGCGCCAAGTCGGAAGGCAGCGGGCGGGTCATGCTGTACGAGGCGGACGAGGTCGGCTTCCGCCGACTGGAAGCCGAAATGGGCTGGGCGGCGGACTTCGCCCAGGCGCTGGAAGCCAATCAGTTCCTGCCGTACCGCCAGCTGATCCAGCCCGCCTCGCCCGGCGGCCAGCCGCATTACGAGGTGCTGATCCGCTGGCAGCGAAACGGCCAGATCGAAGGCCCTGCCAAACTCCTGCCCGCGCTGGAACGCTACGGCCAGGCGCCGATTCTCGACCGCTGGATGCTGGAAGCGGTGATTTCCTACCTGGCGTCGCAGCCCGACGACCAGGCGGTGTATTTCATCAACCTGTCGGGCAAGACCGTCGCCGACGAGTCCTTCCTCGGCATCGTCTGCGCCCTGCTCGACCGCTACGGCGTGGCCGGCGAACGGCTGGGCTTCGAGGTCACCGAGACCGCGGCGGTGGTCAACCTGGAAGACGCCCAGCGCCTGATCCACGGCCTGCGCGAGCGCGGCTGCCAGTTCGCGCTGGACGACTTCGGGCGCGACGCCTCGTCCTTCTTTTATCTCAAGCACCTGCCGGCCGACTACCTCAAGATCGACGGCGCCTTTGTGCGCGGCATGCTGGACGATCGTCGCGACCAGGCGATCGTGCGCTCGATCGCCAAGCTGGCGAGCGACTTCGGCATGCGCTCGATCGCCGAACAGGTGGAGGACGCCGACATGGCGGCCCTGCTGCGCGATATCGGCGTGGATTACCTGCAGGGCTACCACATCCATCGCCCGGAAGCCTTCCCGGGCTGGCAGGCCGTCACCCGCCTGCCGCATCTGACAAGGATCAAATAG
PROTEIN sequence
Length: 914
MRLTQLDTQARILSALALVVVIVVVLAGQQALQAARQNVDAALREVAETQFASLSQAVTDAAILRDHYALQAHLEVPVARGILRYAEYTAPDGHVLRRDAGMQRVERPDWFAALARLEPPHLQANIVIGGTDYGHLALQPSPHVREDFLWHLVTRLFLLLAGAFALLGWLTRALLRTNLQDLTRLRAAARRIETGDYRTRIPIRPGSPPELRETTQAFNHMSAALEQLLANLNEQQAALDHTACISETDLAGNITYVNDLFCAISGFNREELIGRNHRIVNAGHHVAAFFDELWTTIGRGRTWRGEMCSRARDGRLFWTATTIIPIKDDDGLPSKYLSIRFDITQRKLDEAALSAEKERWQVTLQSINDAVIVTQADSRVAYINPAAEHLLGIALEEATSIPLKHLMQFDQIKSEDEGPTCFLSPASAPRGQTGSVRLHTRQGQALAISYSCAPLGAHGGVGAVYVLRDETEKKQLLDSLREMAFHDPLTALPNRRAVEGRLDRAMRIAREDAQQHAFCYIDLDQFKLVNDTCGHSVGDSLLKNIAQAMKEALPEQAYLGRLGGDEFGLILFDTRTQDAIEICRQLVQRIRDYRFEHNGRRFALGACAGIAPITAAAATTSGIMIQADMACYRAKSEGSGRVMLYEADEVGFRRLEAEMGWAADFAQALEANQFLPYRQLIQPASPGGQPHYEVLIRWQRNGQIEGPAKLLPALERYGQAPILDRWMLEAVISYLASQPDDQAVYFINLSGKTVADESFLGIVCALLDRYGVAGERLGFEVTETAAVVNLEDAQRLIHGLRERGCQFALDDFGRDASSFFYLKHLPADYLKIDGAFVRGMLDDRRDQAIVRSIAKLASDFGMRSIAEQVEDADMAALLRDIGVDYLQGYHIHRPEAFPGWQAVTRLPHLTRIK*