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FFSP_072018_bottom_0_1um_scaffold_767_15

Organism: FFSP_072018_bottom_0_1um_Hydrogenophilales_65_12

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 3 ASCG 13 / 38 MC: 3
Location: 12146..13042

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 74.8
  • Coverage: 298.0
  • Bit_score: 445
  • Evalue 9.60e-123
tRNA pseudouridine synthase B {ECO:0000255|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000255|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000255|HAMAP-Rule:MF_01080}; Short=Psi55 synthase {ECO:0000255|HAMAP-Rule:MF_01080};; tRNA pseudouridylate synthase {ECO:0000255|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000255|HAMAP-Rule:MF_01080}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.8
  • Coverage: 298.0
  • Bit_score: 445
  • Evalue 4.80e-122
tRNA pseudouridine synthase B n=1 Tax=Thiobacillus denitrificans RepID=UPI00036D3574 similarity UNIREF
DB: UNIREF100
  • Identity: 80.5
  • Coverage: 298.0
  • Bit_score: 482
  • Evalue 1.90e-133

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 897
GTGAAAGCAGCGCGTCAGGTCGTCGATGGCGTGCTGCTGCTGAACAAGCCGATCGGCATCACCTCCAACGCCGCGCTTCAAAAAGCCAAGTGGCTGCTCAATGCCAAAAAGGCGGGCCACACCGGCACCCTCGATCCGTTCGCCGACGGCCTGCTGCCGCTGTGTTTCGGCGAAGCGACCAAGTTTTCCGCCTACCTGCTCGAAGCCGACAAGCACTATCGCGCGGTGCTCCAGCTCGGCGTCACCACCACGACCGGCGACCTGGAAGGCGAGATCCTCGCCACCCGCGAGGTCCATGCCAGCCGTTCTGAAATAGAGGCCCTGCTGCCGCGCTTCACCGGCGCAATCGAGCAAATCCCGCCGATGCATTCGGCGCTCAAGCACCAGGGCCGCCCGCTCTACGAATACGCGCGCGCCGGCATCGAGATCGAACGTCCACCCCGCCAGGTACAGATTCGCGCGCTTGAACTCGTCGAATGCGATCCGCCGCGCGTGGTGCTGGACGTGCAATGCAGCGCCGGCACCTATATCCGCACGCTGGCGCAGGACATCGGCGCGGCGCTCGGCTGCGGTGCCCACCTGACCGCGCTGAAACGCACGGCAGCAGGGGGGTTCAGCCTGGATCAGGCACACACGCTGACCGAACTGGAAGCGCTCGACGCCCCGCTGCGCCCCGCCCTGCTGCTGCCTGCCGATTGCCTGGTGGCGCACCTGCCCGCGCTCGAGCTCGATGCGGCCGACGCTGCGGCACTGTGCCAGGGCCGCAGCGTCGCGCATGCCAGCGCCCATCCGGGGCTCAACCGGGTCTATGCCGCATCCGGCGCCTTCATCGGGCTGGCCGACAGCGATGGCGCCAGCCTGACGCCGCGCCGGTTGGTGGCCACCCAGCAGACTTGA
PROTEIN sequence
Length: 299
VKAARQVVDGVLLLNKPIGITSNAALQKAKWLLNAKKAGHTGTLDPFADGLLPLCFGEATKFSAYLLEADKHYRAVLQLGVTTTTGDLEGEILATREVHASRSEIEALLPRFTGAIEQIPPMHSALKHQGRPLYEYARAGIEIERPPRQVQIRALELVECDPPRVVLDVQCSAGTYIRTLAQDIGAALGCGAHLTALKRTAAGGFSLDQAHTLTELEALDAPLRPALLLPADCLVAHLPALELDAADAAALCQGRSVAHASAHPGLNRVYAASGAFIGLADSDGASLTPRRLVATQQT*