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RTP_03222018_0_2um_scaffold_3067_4

Organism: RTP_03222018_0_2um_Betaproteobacteria_48_16

partial RP 38 / 55 BSCG 40 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(1930..2511)

Top 3 Functional Annotations

Value Algorithm Source
type IV pilus assembly protein PilN; K02663 type IV pilus assembly protein PilN id=12495844 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 61.7
  • Coverage: 193.0
  • Bit_score: 226
  • Evalue 2.10e-56
Fimbrial protein {ECO:0000313|EMBL:GAO34842.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.0
  • Coverage: 193.0
  • Bit_score: 220
  • Evalue 1.20e-54
type IV pilus assembly protein PilN similarity KEGG
DB: KEGG
  • Identity: 58.5
  • Coverage: 193.0
  • Bit_score: 219
  • Evalue 5.60e-55

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Taxonomy

Sulfuricella sp. T08 → Sulfuricella → Sulfuricellales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 582
ATGATACGCATTAATTTACTTCCTTATCGTGAGATGCAGCGTGCCGCACGGTTGCGACATTTTAGCGCGTTGCTTGGTTTTGCTGTGGTTACGGCGTTAGGCGTAATAGTGTTAGGTTATTTGACCTTGGAAGCACGTATTAGTACGCAGAATCAACGCAATGAATATCTAAAAGCTGAAATCGTTAAGCTAGATAAAGATATTGCAGCGATTAAGCAATTAAAAGAACAGACAGCTGCTCTGTTATCACGCAAACAAGTGGTGGAGGCGCTGCAAACGAATCGTTCTAGTGCCGTACATTTACTGGATGAGCTAGTGCGTGATTTACCTGATGGCATTTATTTGAAATCCATCAAGCAAACGGGAAGCACGATTAACTTGCAAGGTTATGCGCAATCCAGTGCGAGGGTGTCAACATTAATGCGTAATTTGGATGCCTCTCCTTGGTTGGATAGCTCGCAGTTGGTCGAGATTAGAGCGGCGACAGTGCAAGGTCTGCGCGCGAATGAATTTAGTTTGACCGTGAATTTAGTTCAGCCTGATACAGAGGCAGCAAAAAATAAAGAGGGGGGTAAATCATGA
PROTEIN sequence
Length: 194
MIRINLLPYREMQRAARLRHFSALLGFAVVTALGVIVLGYLTLEARISTQNQRNEYLKAEIVKLDKDIAAIKQLKEQTAALLSRKQVVEALQTNRSSAVHLLDELVRDLPDGIYLKSIKQTGSTINLQGYAQSSARVSTLMRNLDASPWLDSSQLVEIRAATVQGLRANEFSLTVNLVQPDTEAAKNKEGGKS*