ggKbase home page

RTP_02272018_0_2um_scaffold_187_13

Organism: RTP_02272018_0_2um_Hydrogenophilales_59_70

near complete RP 46 / 55 MC: 3 BSCG 47 / 51 MC: 1 ASCG 12 / 38
Location: comp(13127..14017)

Top 3 Functional Annotations

Value Algorithm Source
ribosomal large subunit pseudouridine synthase B (EC:5.4.99.-); K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] id=12493951 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 89.2
  • Coverage: 296.0
  • Bit_score: 532
  • Evalue 2.10e-148
ribosomal large subunit pseudouridine synthase B (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 87.2
  • Coverage: 296.0
  • Bit_score: 527
  • Evalue 1.90e-147
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 89.9
  • Coverage: 296.0
  • Bit_score: 545
  • Evalue 4.40e-152

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 891
ATGTCCCGCCCCACATCCCCCATCCGCCGTTCGCCTTCCGCTCCCATGGGACGCGCGGCGAGCCGTCTGCAACAGGCTACCGCCCCCGAGGCGGCGAGCGAACGCCTGCAAAAAGCGCTGGCATCGGCCGGGGTCGGTTCGCGTCGCGAGATGGAGGAATGGATTGCCCAGGGTCGGGTTCAGGTCAATGGCGAGACGGCCCTGATCGGCAGCAAGGTCGGGCCGCGCGATGTCGTCAAGGTCAGTGGCCGGCGCGTGTATTTGCGTTTTGATGAGAAGCGCACGCGCATTCTGATTTATCACAAGTCGGAAGGCGAGATCGTCACGCGCGACGATCCCAAGGGCCGCCCCACGGTGTTTGATGCCTTACCCAGACTGCGTGGCGCCAAATGGATTGCCATTGGCCGGCTGGATTTCAATACCGACGGGCTGATGGTGTTCACTACCTCGGGCGAACTCGCGAATAACCTGATGCACCCGCGCTTTGAAGTCGAGCGTGAATATGCGGTACGTGTATTGGGCGAGTTGTCCGAAGACATGATTGCGCAATTGCTGGCAGGCATTGAGCTCGACGATGGCCCGGCGCAGTTGCAAAGCTGTTTTGCTGCAGGCGGCGAAGGGGTAAACCGCTGGTATCGCGTGATTATCAAGGAAGGCCGCAAACGCGAAGTGCGTCGGATATTCGAACATTTCAAGCTGACCGTATCGCGCCTTACCCGCATCCGCTTTGGTCCGATTGCATTGCCACCGCAACTGCGCCGTGGCCAGAAAATGGAGCTTGAAGACGATCTGGTTGCGCGCGTGCTGGACTGGGCAGACATGGCGCCGAGTCCGCGCCGGCAGATGCGCGGCGTGCCGGATAAGCACACGCGCAAACCACGCATGCGTTAA
PROTEIN sequence
Length: 297
MSRPTSPIRRSPSAPMGRAASRLQQATAPEAASERLQKALASAGVGSRREMEEWIAQGRVQVNGETALIGSKVGPRDVVKVSGRRVYLRFDEKRTRILIYHKSEGEIVTRDDPKGRPTVFDALPRLRGAKWIAIGRLDFNTDGLMVFTTSGELANNLMHPRFEVEREYAVRVLGELSEDMIAQLLAGIELDDGPAQLQSCFAAGGEGVNRWYRVIIKEGRKREVRRIFEHFKLTVSRLTRIRFGPIALPPQLRRGQKMELEDDLVARVLDWADMAPSPRRQMRGVPDKHTRKPRMR*