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RTP_02272018_0_2um_scaffold_187_19

Organism: RTP_02272018_0_2um_Hydrogenophilales_59_70

near complete RP 46 / 55 MC: 3 BSCG 47 / 51 MC: 1 ASCG 12 / 38
Location: comp(19500..20240)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor FliA n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SJF9_THIDA similarity UNIREF
DB: UNIREF100
  • Identity: 88.2
  • Coverage: 246.0
  • Bit_score: 437
  • Evalue 5.90e-120
RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 88.2
  • Coverage: 246.0
  • Bit_score: 437
  • Evalue 1.70e-120
RNA polymerase sigma factor FliA {ECO:0000256|HAMAP-Rule:MF_00962}; RNA polymerase sigma factor for flagellar operon {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma F {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma-28 {ECO:0000256|HAMAP-Rule:MF_00962}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.2
  • Coverage: 246.0
  • Bit_score: 437
  • Evalue 8.20e-120

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 741
ATGTACACCGTAACTGGCCGAAGCGAAAAAGGCGAAAAAGGCGACTTGCTGACGCTATACATGCCAATGGTCAAACGACTGGCACACCATATGATGGGGCGCTTGCCGCCCAGCGTAGAAGAGGATGACATCGTTCAGGCCGGCATGATGGGTTTGCTGGATGCCATCAGTCGCTATGACGAAGCGCAAAGTGCGCAATTCGAAGCCTATGCCATTCAACGCATCCGTGGCTCGATGATTGACGAGCTGCGTCATTCCGACTGGATGCCACGTAGCGCCCGGCAATCGATGCGGAAAATAGAAAAAGCCATCGGCATGCTGCAACATCAATTGGGGCGTCAACCCAGCGAAGGCGAAATAGCCAATGCCATGCAGCTTCCACTGGAAACGTATCAATCGCTGCTGGGCGATGCACGGGGTCACCAGTTGATGTATTTCGAGGATTTCGGCGAATCGGACGAGAATGATTCCTTTCTCGACAAGCAGTCGGCGAATGAATCCAGTATGCCGTTGCCGCAATTGCTCGATGCCAATTTACGTGCCTGCATCATCGCCGGTATTGAAAATCTGCCCGAGCGCGAACAATTGTTGATGTCGCTGTATTACGAGCAGGAGCTCAATCTGCGTGAAATTGCTGAAGTATTCGGTGTCAGCGAATCCCGCATTTGTCAGCTTCATGGCCAGGCTATCGCACGACTGCGTACCAAGCTGAAGGAAGATTCGTGGATCGCGGCAGCCTGA
PROTEIN sequence
Length: 247
MYTVTGRSEKGEKGDLLTLYMPMVKRLAHHMMGRLPPSVEEDDIVQAGMMGLLDAISRYDEAQSAQFEAYAIQRIRGSMIDELRHSDWMPRSARQSMRKIEKAIGMLQHQLGRQPSEGEIANAMQLPLETYQSLLGDARGHQLMYFEDFGESDENDSFLDKQSANESSMPLPQLLDANLRACIIAGIENLPEREQLLMSLYYEQELNLREIAEVFGVSESRICQLHGQAIARLRTKLKEDSWIAAA*