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RTP_02272018_0_2um_scaffold_258_18

Organism: RTP_02272018_0_2um_Hydrogenophilales_59_70

near complete RP 46 / 55 MC: 3 BSCG 47 / 51 MC: 1 ASCG 12 / 38
Location: comp(13573..13989)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BTV9_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 65.9
  • Coverage: 138.0
  • Bit_score: 188
  • Evalue 2.70e-45
nucleic acid-binding protein, contains PIN domain similarity KEGG
DB: KEGG
  • Identity: 52.2
  • Coverage: 138.0
  • Bit_score: 144
  • Evalue 2.10e-32
Tax=CG_Beta_01 similarity UNIPROT
DB: UniProtKB
  • Identity: 81.8
  • Coverage: 137.0
  • Bit_score: 228
  • Evalue 4.20e-57

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Taxonomy

CG_Beta_01 → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 417
ATGATCGTTGTTGACACCAATGTGATTTCCGAAGTCATGCGCCCGCAGCCTTCGCCGGCTGTTCTTGATTGGCTGAATATCCAGGAAAGCAATCTGCTATTCATTACTACGGTTACACTGGCCGAAATCGGATACGGCCTGCGCGTTTTGCCAGATGGCCTGCGCCGTCGGCAGTTGCAAACCCGGTTTGAACAATTCATAGCGCAGGCATTTGAAGAACGGGTGCTCGACTTTACCGCACCTGCCGCCCACGCCTATGCTGAAATCATGGGGCATCGCAAGGAAACAGGGCGCGCCATGAGCCTGCCGGACGGGCAAATTGCCAGCATCGCCCTCGCCCATGGATTTGCCGTAGCCACCCGAAACATCAAGGACTTTGAGGATTGCGGCATCGAATTGATCAATCCATTTGAATAA
PROTEIN sequence
Length: 139
MIVVDTNVISEVMRPQPSPAVLDWLNIQESNLLFITTVTLAEIGYGLRVLPDGLRRRQLQTRFEQFIAQAFEERVLDFTAPAAHAYAEIMGHRKETGRAMSLPDGQIASIALAHGFAVATRNIKDFEDCGIELINPFE*