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RTP_02272018_0_2um_scaffold_1240_7

Organism: RTP_02272018_0_2um_Betaproteobacteria_47_68

near complete RP 52 / 55 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 3
Location: 9173..9904

Top 3 Functional Annotations

Value Algorithm Source
flagellar biosynthesis sigma factor n=1 Tax=Duganella zoogloeoides RepID=UPI000367A9C6 similarity UNIREF
DB: UNIREF100
  • Identity: 72.6
  • Coverage: 241.0
  • Bit_score: 365
  • Evalue 2.10e-98
fliA; RNA polymerase sigma factor for flagellar operon similarity KEGG
DB: KEGG
  • Identity: 73.3
  • Coverage: 243.0
  • Bit_score: 365
  • Evalue 6.10e-99
RNA polymerase sigma factor FliA {ECO:0000256|HAMAP-Rule:MF_00962}; RNA polymerase sigma factor for flagellar operon {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma F {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma-28 {ECO:0000256|HAMAP-Rule:MF_00962}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.3
  • Coverage: 243.0
  • Bit_score: 365
  • Evalue 3.00e-98

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Taxonomy

Janthinobacterium agaricidamnosum → Janthinobacterium → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 732
ATGTATAACGCAAATGGCAAATCTGATAAAAATCAATTACTCAAAGACCATGCGCCTTTGGTAAAACGATTGGCATATCAACTTCGCGCTAAATTACCTGCCAGTGTAGAGGTGGATGATTTGATTCAAGCGGGGATGATGGGTTTATTGGATGCGGTAAATCGTTATGAAGAATCGCACGGTGCCCAATTTGAAACGTATGCTGTGCAGCGCATACGTGGGGCGATGCTGGACGAATTAAGAAGCACTGACTGGTTACCGCGTAATGTGCGTCAAAATATGCGGAAAATAGAAGTAGCCATGTCGGCGTTGCAACAAAAACTTGGGCGCATGCCTACCGAATTAGAAGTCGCTCAAGCATTAAAAATGACGCTGGCAGAATACCAGGATTTACTAGGCGAAAGTAGTGGTCATCAACTCATTTATTACGAGGATTATCATAACGAAGATGAAAGTGACAGTTTTTTAGATCGTTTTTGTGTGGACTTATCGGGTGACCCGCTTTCTGCTTTGCTCCAAGATGATTTCAAGGATGCGCTAATTGGCGCAATCGACAGCTTACCTGCACGTGAAAAAATTTTGATGGGTTTATATTACGAACAAGAGCTGAATTTAAAAGAAATTGGGGCGGTCATGGGCGTTTCCGAGTCACGTGTTTGCCAATTGCACAGCCAGGCAGTTGCCCGTATTCGGGCTAGTTTAAGGAGCCAATTGTGGACTGGGGCAGTATAA
PROTEIN sequence
Length: 244
MYNANGKSDKNQLLKDHAPLVKRLAYQLRAKLPASVEVDDLIQAGMMGLLDAVNRYEESHGAQFETYAVQRIRGAMLDELRSTDWLPRNVRQNMRKIEVAMSALQQKLGRMPTELEVAQALKMTLAEYQDLLGESSGHQLIYYEDYHNEDESDSFLDRFCVDLSGDPLSALLQDDFKDALIGAIDSLPAREKILMGLYYEQELNLKEIGAVMGVSESRVCQLHSQAVARIRASLRSQLWTGAV*