ggKbase home page

RTP_02272018_0_2um_scaffold_1332_20

Organism: RTP_02272018_0_2um_Betaproteobacteria_47_68

near complete RP 52 / 55 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 3
Location: comp(16282..16977)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type antimicrobial peptide transport system, ATPase component n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QG95_AZOSU similarity UNIREF
DB: UNIREF100
  • Identity: 66.2
  • Coverage: 222.0
  • Bit_score: 289
  • Evalue 2.40e-75
antimicrobial peptide ABC transporter ATPase similarity KEGG
DB: KEGG
  • Identity: 66.2
  • Coverage: 222.0
  • Bit_score: 289
  • Evalue 6.80e-76
Tax=CG_Gallio_01 similarity UNIPROT
DB: UniProtKB
  • Identity: 65.5
  • Coverage: 226.0
  • Bit_score: 297
  • Evalue 9.50e-78

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CG_Gallio_01 → Gallionellales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 696
ATGACAAACATCATCGAAGTCAGTCAGTTAGGCAAAGACTACGCCACCGCAGCGGGCACATTTACTGCGCTGCAATCGGTGAGTTTAACCATTGCACAGGGTGAGTTTGTTGCGATTATGGGACCGTCAGGTTCAGGAAAGTCGACGTTGATGAATATGTTGGGCTGCCTGGATTATCCCAGTCGGGGCGAATATAAACTGGATGGTGAACAGGTTGCCAGTTTATCCAGTGATGCTTTGGCAGCATTGCGTAATCGCGTCATTGGTTTTGTGTTCCAAGGTTTTAATTTATTGCCACGCCTCAATGCCCGCGACAACGTCGCACTGCCTATGTTGTATCGGGGTGCATCCAGCACAGAACGCAAACTACGTGCTGATGAAATGCTTGCTAAAGTCGGGCTGGCCAATCTCGGCGACCGCCGTCCCAATCAGCTCTCTGGCGGGCAGCAGCAACGTGTTGCAATTGCACGCGCGCTCTCCAATGCGCCACACCTTATCCTCGCCGACGAGCCCACGGGCAACCTTGACAGCCACACCAGTGACGACATCATGCATTTATTTACTGAGCTAAATCACAGCGGTATTACTATCGTTCTCGTTACCCATGAACCTGAAATTGCTAAGTATGCTAAACGCCTGGTTCGTTTCAAAGACGGTGAACTGATATATGACGGTAACCCTGAGGGCGGATTATGA
PROTEIN sequence
Length: 232
MTNIIEVSQLGKDYATAAGTFTALQSVSLTIAQGEFVAIMGPSGSGKSTLMNMLGCLDYPSRGEYKLDGEQVASLSSDALAALRNRVIGFVFQGFNLLPRLNARDNVALPMLYRGASSTERKLRADEMLAKVGLANLGDRRPNQLSGGQQQRVAIARALSNAPHLILADEPTGNLDSHTSDDIMHLFTELNHSGITIVLVTHEPEIAKYAKRLVRFKDGELIYDGNPEGGL*