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cn_combo_scaffold_130_26

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: 27369..29027

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI00026279A1 similarity UNIREF
DB: UNIREF100
  • Identity: 35.2
  • Coverage: 548.0
  • Bit_score: 272
  • Evalue 1.20e-69
Bacterial regulatory protein, Fis family protein {ECO:0000313|EMBL:EJI95932.1}; TaxID=745408 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. similarity UNIPROT
DB: UniProtKB
  • Identity: 34.5
  • Coverage: 554.0
  • Bit_score: 271
  • Evalue 3.00e-69
Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 34.9
  • Coverage: 550.0
  • Bit_score: 267
  • Evalue 1.10e-68

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Taxonomy

Rhodococcus sp. JVH1 → Rhodococcus → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1659
ATGAGGCCTACCAGTAGCCAGGCCGAGCGCCGCCGGGAGGTCGTCGCGGACTCATGGCGGCGAGCCCGGCTGTGGGGGATCGACACTGGAGTACGTATCAGCTCACTCACGCGTTCGGAGGTCGACCCGGACACCCGGTGGCTCACGGTCGCGACACCGGTTCTCGATGCGGCTCTCGCAGAGCTGAGCGATGTCGACATGGCGGTGATCCTGGCTGACGACACAGCCAAGATCCTCAGTGTCCGTCGTACAGCCGCCAGGTCGGAAATGGCCGACGAGATCGAGGAGCTCACCGTCGGCCGACGCTCCACGGAAGAAAACCTTGGCACGAACTCGGTCGGGACTGCCATTGAACTGCGCGCAGCGGTGCGTGTCGATGCCGACGACCACTACGCAGAGGAGTTCCGCCACCTCAACTGCATCGGACGCCCGGTGGTCAACCCACTCACCCGCCGGCTCGTCGGTGTAGTCAACTTCGCGTCCGCCCGGGGCGACCGCTATCCCGGCATGGGCGCTCTGCTTGCGGAGATCGCACGCACGCTGGAGGCGGAGTTCGCCGCATCGTTGCCTCGCGAGCACGTCAGCCTGCTCCAGGCGTTTCACGCGTCCCGACGCGGAGCACGGCCGGTTGTGGCACTCGGCGATGACCTGCTGCTGGCCAACGACGCAGCGATGTCGCTCCTCAACGGGCCCGGCGACTTCGACCACCTTCGCGCGCTGTGCCGGGAGCTCGACGGCGAGGGACCGGCGCGGGTCCGCCTCGACCTCGCATCCTTCGACCAGGAGGTGACGATCAAGCCGCACGGCAGCGATGGCTGGCTCCTGGAGTTCGCGAGGAGGCCCGGTAGCCATCACGTGGCCGCGACGAGGCCAGACCCGGTCGATGCGGAGCTCGTCTTCGCTCGAGCACGCCGGGTGCCGACCCTCATCACCGGCGAACCTGGAGCGGGACGTTCGAGCGCTGCCGACAAGCTGGCCGGAGACACCGAAGCAGTCCACATCCGATGCGCCGACGCGGCGGGGTCGCCGACGCAGTGGCGACATCGGTTGCGTGCCGCTCTGTCGCCCCACGGGAACCCTGACGGCTGCGTCGACCGACTGGTCGTGCTCGACGGCATCGAGTCGCTGCCGCCGGGATGCGCCCGCGAGGCAGTCGACCTGATCGAGCGCTCGCGCGTCTGGGTCGCGCTGATCACCCTGGGACACGAGCACCTGACCGGGGACCAGTCCACGCTGGCAGCGAGGTGCGTGGCCCGGGTCGACCTACCACCGCTTCGTGACCGGGTGTCCGAGCTTCGCACCCTCGTCAAGGACGTCGCACGCCGGGCAGGTCGACCCGACGGGGGGCCGGTGTGGTCCACGGACGCTCTCGATGCTCTGCGTGCACACCGCTGGCCAGGCAACTTCCACGAGCTGACGATGGTGGTGTCCCAAGCTCTTCGCACCGCTGACGTAGGGCCGGTGAGGATCGCGGACCTGCCACCGGCGTACCAGGACCGTCCGCGCCGGGCGTTGACGGCTCTGGAGCAGTCGGAGCGTCAGGTGATCATGACCGCGCTGGCGAGCTGCGGTGGCAACAAGCGCCGGGTCGCATCGGATCTCGGGATGAGCAGGACCACCCTCTACAAACGGCTGCGACTGCTCGACATCCAGCACTGA
PROTEIN sequence
Length: 553
MRPTSSQAERRREVVADSWRRARLWGIDTGVRISSLTRSEVDPDTRWLTVATPVLDAALAELSDVDMAVILADDTAKILSVRRTAARSEMADEIEELTVGRRSTEENLGTNSVGTAIELRAAVRVDADDHYAEEFRHLNCIGRPVVNPLTRRLVGVVNFASARGDRYPGMGALLAEIARTLEAEFAASLPREHVSLLQAFHASRRGARPVVALGDDLLLANDAAMSLLNGPGDFDHLRALCRELDGEGPARVRLDLASFDQEVTIKPHGSDGWLLEFARRPGSHHVAATRPDPVDAELVFARARRVPTLITGEPGAGRSSAADKLAGDTEAVHIRCADAAGSPTQWRHRLRAALSPHGNPDGCVDRLVVLDGIESLPPGCAREAVDLIERSRVWVALITLGHEHLTGDQSTLAARCVARVDLPPLRDRVSELRTLVKDVARRAGRPDGGPVWSTDALDALRAHRWPGNFHELTMVVSQALRTADVGPVRIADLPPAYQDRPRRALTALEQSERQVIMTALASCGGNKRRVASDLGMSRTTLYKRLRLLDIQH*