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cn_combo_scaffold_392_14

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: 10773..11531

Top 3 Functional Annotations

Value Algorithm Source
GntR family transcriptional regulator n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEA24 similarity UNIREF
DB: UNIREF100
  • Identity: 82.1
  • Coverage: 252.0
  • Bit_score: 407
  • Evalue 1.10e-110
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EJI99045.1}; TaxID=745408 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. JVH1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.5
  • Coverage: 247.0
  • Bit_score: 364
  • Evalue 9.10e-98
Galactonate operon transcriptional repressor similarity KEGG
DB: KEGG
  • Identity: 74.1
  • Coverage: 247.0
  • Bit_score: 363
  • Evalue 5.30e-98
  • rbh

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Taxonomy

Rhodococcus sp. JVH1 → Rhodococcus → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 759
GTGCCTACCGGCGAATCCCGATCGACGATCCGCCTCTCCCCCATGGAGGTCCCGAAGGCGTCCGACGTCCTCGCGAACGAGCTGCGCGAACGCATCCTGTCCGGCGAGTACGTCGAGGGGACGCCGCTGCCGCCCGAGCGCGAGCTCGTCGTCCAGACGCGGATGAGCCGCACCACCGTCCGCGAGGCGCTGCGCATCCTCGAGGTCCAGGGCCTCATCCGGATCAAGGCCGGCCGCGCCGGTGGCGCGTTCGTCCAGAAGCCCGGCGAGGAGTCGGTGGCCAGCTCGCTCGACCTGCTCATCCGCGGCCGCCAGCTGCGGCTCGCGTCGGTCCACGAGACCCGCGAGGCCATCGAGCCCTCCTGCGCGCGGCTCGCCGCGCTGCACCGCACCGCCGGCGACCTCGCCCGGCTGGACGCGGCCAACGAGGCCATCGCCACCAGCGGCGACCTCGACAGCTTCCTGCGCGCCAACGTCGACTGGCACGTCGCCGTGGCCACGGCCAGCCACAACGAGATCCTGACGGGCATCATGATGGCGCTCTCCCGGGCCATCTACACGACGACGAACAACGAGGGCTTCGTCAACGACGAGGTCCGCGACATCGCCGTCCGCGCCCACCGCTCGGTGACCCGGGCGATCAAGGAGCGCGACGCCGACGCCGCGGTCCGCCGGATGCTGCGCCACGTGCACTCCTACGCCGCGGCGGCCCTCGCCGTCGACGAACGCACGACGGTCGCGGTCCCCGCCGCGGACTGA
PROTEIN sequence
Length: 253
VPTGESRSTIRLSPMEVPKASDVLANELRERILSGEYVEGTPLPPERELVVQTRMSRTTVREALRILEVQGLIRIKAGRAGGAFVQKPGEESVASSLDLLIRGRQLRLASVHETREAIEPSCARLAALHRTAGDLARLDAANEAIATSGDLDSFLRANVDWHVAVATASHNEILTGIMMALSRAIYTTTNNEGFVNDEVRDIAVRAHRSVTRAIKERDADAAVRRMLRHVHSYAAAALAVDERTTVAVPAAD*