ggKbase home page

cn_combo_scaffold_471_11

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: 9412..11106

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI000363F596 similarity UNIREF
DB: UNIREF100
  • Identity: 47.8
  • Coverage: 557.0
  • Bit_score: 444
  • Evalue 1.90e-121
ABC transporter-like protein similarity KEGG
DB: KEGG
  • Identity: 45.0
  • Coverage: 555.0
  • Bit_score: 431
  • Evalue 3.60e-118
  • rbh
ABC transporter related {ECO:0000313|EMBL:ABW15289.1}; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.0
  • Coverage: 555.0
  • Bit_score: 431
  • Evalue 1.80e-117

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Frankia sp. EAN1pec → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1695
ATGCCGTCCCCAGTGGTCGGATCACGACAGTTCCTGCGCTGGTGCCTGCGCCTGCAGTGGCGCGGGCTCACGGGCGCGACCGTCGTCGGCGTCGTCGTCCAGCTCCTGTACGTCGCGCTGCCGTGGGCCGTGCAACGCGCGCTCGACGACGGCGTCACCACCGGCTCGACCGCGGCGACCGCGAAGTGGGCGGGCGTGCTGGTCGCGATCGGTGTGGCGCTCGTGCTCAGCCGTCGTCTCGAGCAGCGGCTCAACTACATGGCCGGGGCGAAGGTGCTCGTCACCGTGCGCCAGCGGCTCAACGACCACCTGCTCACGGTCGACCGAACGGCGCTCGACGGGCTCGACCAGGGCGACCTCGTCACCCGCAACGGGCGTGACGTCGAGGAGCTGTGGGCCTGGATCAGCGGCGTGATCGAGTCGGTGCAGGTCGTCGTCGGGCTGGTGGTCACACTCGTCGCCATCGCGCTGCTCGACCCGAACCTCGCCCTCGTCGGCGTCGCGACGGTGCCGCTGCTGGTGCTGATCGCGGTCCTGTTCCGCAACCGCTACGAACGGCGCAGCCGCGTGGTCGGCGACTCCCACGGCGCCCGCGCCGACCTGGTCGAGGGGCTCGTCAGCGCCGGTGTCGCCGTGCGCGGGCTGGGCGGCGAGCACGTACTCGTCGAGCGGCACGGCCGGGTGAGCGGCCGGGTCACCACCGAGACCCTGCGCCTGGCCAGGGTCGGCGCGGCGTGGTCGTCGCTGTCGGGTTTCGTGCCGCTGGCGGCGACGGCGGTCGGTGTCGCGGTCGGCGGCCTCGCCGTCCTCGACGGCCGCATGTCGCTCGGCGGGCTCGTCGCGTTCGTGACCTGGATGGAGATGCTCGCGTCGCGCGTCGCGGCGCTGGTCGGTCAGCAGGTCACGCGCAAGCAGGCCGCGGCAGCCGGGGCCCGGATCAGTGAGGTCCTCGACCGGGCACCGACGGTGCGCGACCCCGACGACCCGGTCCCGCTGCCCGCCGTCGGTGGGCTCGTCGCGACCGACCTGGTCGTGGGCACGCCGGACCGGCCATGGGGCGGTCCCGTGTCGTTGTCGGTGGGCCGCGGTGAGACCGTCGCGCTGACCGGGCCGACCGGCTCCGGGAAGTCGAGCATCCTGCGCGCGCTCGTCCGGCTCGACGACCTGCTCTCGGGAACGGTGACGTTCGCCGGGACACCGCTCGCCGACGCCGAGTGGGCGCAGGTGCGCCGCCGGGTCGGGTACGTGCCGCAGCGGCCCGTCCTGCTGTCGGGGACCATCGCCGAGAACCTGGGCCTGGGCCTGGAACCGCCACCCGGTGCGGAACGGCTGCGGGAGGCCTGCCGCGCGGCCGCGATCGACGATCACATCGACAGCCTGCCGGAGGGTTACGAGACCCTCGTCGGTGAAGGGGGGACCACTTTGTCAGGTGGTCAGGTGCAGCGCCTCGCGATCGCGCGGGCCCTGCTCGCCGGTACCCCGGTGATCCTGCTCGACGACGTCACGTCGGCGGTGGACACCGGGACCGAGGCCACGATCCTGGACGGTCTGCGCCGGATAGACCCGGACGTGGCGCTCGTCGTGGTGACGCACCGGCCCGCCGTACTCGACATGGCCGACCGGGTCGTCACCCTCGCCGAAGCCGGTTCGCTGGCCGGTCAGGGCGTCATGGCCGGAGGTGAGGACCGTGGCTGA
PROTEIN sequence
Length: 565
MPSPVVGSRQFLRWCLRLQWRGLTGATVVGVVVQLLYVALPWAVQRALDDGVTTGSTAATAKWAGVLVAIGVALVLSRRLEQRLNYMAGAKVLVTVRQRLNDHLLTVDRTALDGLDQGDLVTRNGRDVEELWAWISGVIESVQVVVGLVVTLVAIALLDPNLALVGVATVPLLVLIAVLFRNRYERRSRVVGDSHGARADLVEGLVSAGVAVRGLGGEHVLVERHGRVSGRVTTETLRLARVGAAWSSLSGFVPLAATAVGVAVGGLAVLDGRMSLGGLVAFVTWMEMLASRVAALVGQQVTRKQAAAAGARISEVLDRAPTVRDPDDPVPLPAVGGLVATDLVVGTPDRPWGGPVSLSVGRGETVALTGPTGSGKSSILRALVRLDDLLSGTVTFAGTPLADAEWAQVRRRVGYVPQRPVLLSGTIAENLGLGLEPPPGAERLREACRAAAIDDHIDSLPEGYETLVGEGGTTLSGGQVQRLAIARALLAGTPVILLDDVTSAVDTGTEATILDGLRRIDPDVALVVVTHRPAVLDMADRVVTLAEAGSLAGQGVMAGGEDRG*