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cn_combo_scaffold_637_13

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(9339..10223)

Top 3 Functional Annotations

Value Algorithm Source
Type II secretion system F domain-containing protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E7R5_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 49.8
  • Coverage: 293.0
  • Bit_score: 294
  • Evalue 1.60e-76
Uncharacterized protein {ECO:0000313|EMBL:KDA07183.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.5
  • Coverage: 292.0
  • Bit_score: 326
  • Evalue 5.50e-86
typeII/IV secretion system integral membrane protein, TadC -like protein similarity KEGG
DB: KEGG
  • Identity: 42.8
  • Coverage: 292.0
  • Bit_score: 234
  • Evalue 3.30e-59

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Taxonomy

Microbacterium sp. CH12i → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 885
GTGAACCCGCTTCTGTTCCTCATCCCCGGCGTGATCGTCGGCATTGGCCTCGCCATGGCGATCGCCGGGATCATGCCGCAGCGCCCCGCGCTGAGCGCGGCTCTCGCTCGGCTCGGCAACACCACTCCCGTCGAGCAGACCACCGGTCAATCGCTCGAGGTGCGCGTCGGCACGTGGGTGCACCGGCAGCTCCCCACCGACGTCCGGTTCCTCACGATTCCGACGACAGACCTCGCACTGATCGGCATGCCGGTCACGAAGTACCTCTACGACAAGGTCCTCCTCGCCTGCGTCGGGCTCGTCGCTCCGCTCCTCTTCGGCCTCGTGATGCAGGCCGCCGGTATCCTCCCGGTCTGGCTGCCCGGGATCCTCGGCATCCCCCTCGCGATCGCCCTCTGGTTCGCACCTGACCAGGAGATCAGGAGCAAGGCACGCGACGCACGCGAGGAGTTCTCCCGTTCGATCGCCGTCTACCTCGAGCTCGTCGCAGCCGAGCGTCGACGAGGCGCCCCAGCCGGCCGCGCGCTGACCAGCGCTGCCGAGGTCGGTAGCACCTGGGTGTTCACCCGACTCCGTCAGGAACTCAACCGCGCCAACTACGCAGGCGTCGCACCCTGGGATGCGCTCACCACGTTCAGCGCCGAGATCGGCGTACCCGAGCTCGCTGACGTCGGCAAGATCGTGAAACTCGCAGGAGAGGAGGGTGCTAGCACATATGAGACACTGAGGGCGCGGGGGAAGTCACTCCGCGTGCAGCTGCTCAACAACGAACACACGAAAGCAAATGAGGCATCAGAGCGCATGGTTCTCCCCGTGGTGGGATCGGCAGGCGTCTTCGTGCTGATCATCCTCACCCCGCTTCTGATGAATCTCTTCACCGCCTGA
PROTEIN sequence
Length: 295
VNPLLFLIPGVIVGIGLAMAIAGIMPQRPALSAALARLGNTTPVEQTTGQSLEVRVGTWVHRQLPTDVRFLTIPTTDLALIGMPVTKYLYDKVLLACVGLVAPLLFGLVMQAAGILPVWLPGILGIPLAIALWFAPDQEIRSKARDAREEFSRSIAVYLELVAAERRRGAPAGRALTSAAEVGSTWVFTRLRQELNRANYAGVAPWDALTTFSAEIGVPELADVGKIVKLAGEEGASTYETLRARGKSLRVQLLNNEHTKANEASERMVLPVVGSAGVFVLIILTPLLMNLFTA*