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cn_combo_scaffold_637_14

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(10220..11098)

Top 3 Functional Annotations

Value Algorithm Source
Putative integral membrane protein n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9US59_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 44.0
  • Coverage: 282.0
  • Bit_score: 244
  • Evalue 1.10e-61
Membrane protein {ECO:0000313|EMBL:KDA06951.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.6
  • Coverage: 283.0
  • Bit_score: 257
  • Evalue 2.40e-65
typeII/IV secretion system integral membrane protein, TadB -like protein similarity KEGG
DB: KEGG
  • Identity: 43.5
  • Coverage: 285.0
  • Bit_score: 242
  • Evalue 1.20e-61

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Taxonomy

Microbacterium sp. CH12i → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 879
ATGAACGGCGCACTCGCAGCACTCGCCACCACGATCGGCATCCTCGGCCTGCTCGTCATCGTGCTCGGGTTCCTCCCCGCCCCCGTGCCGCAGGGCCCGAAACCGCCGAGCCGGCTGCAGATCGCGTTCCTCGAGGCGCGTGGCCGCTTCGGCAAGCAGCGCATGATGATCGCCGGCGCCGGCTTCATCGGCGGCATCATCCTGTGGCTGGTCACCGGCTGGATCGTGTGGATCGCGATTGTGCCGCTCGCCGCGGTGGGCGTGCCTTGGCTGCTCGGCAACGGGGGAGAGCAGCGCAAGCTCGATCGCCTTGAGGGGCTCGAGACGTGGACCCGTGGCCTGGCCGGCCTCACGGTCGCCGGATCCAGTCTCGAGCAGACGATCATCGCGTCCGTGAACAGCTCGCCCGACTCCATCCGTGACGAGGTCGCCCTCCTCGCCGCTCGACTCAACGCGCGCTGGCCGACTCGCTCCGCGCTGCGGAAGTTCGCCGACGATCTGGCCGATCCCACAGGAGACCTCATCGTCGCGCACCTGCTCCTCGCCGAGCGGGTCCGAGGCGCTGGCCTCGCCAACGCGCTCGAGGACCTCGCGCAGAGCATCGCCGAAGAGGTCGGCGTGCGCCGCAAGATCGAGGCCGACCGCGCCAAGCCCCGTCAGGCGATCCGGATCACCACGATCGCCACAGTCGTCCTCATCGGCATGATGCCCTTCGTCAGCCAGTTCATGGCTCCCTACAAGACGCCCCTCGGGCAGCTAATCCTGGCGGTCCTGATCACACTGGACGTCGTCATGCTGCTCTGGCTGAAGAAGATAACAGCGGGCAAGCCGACTCCGCGGATCCTCGCGGATCTCTCCGACTCAAAGGGGGCATTGTGA
PROTEIN sequence
Length: 293
MNGALAALATTIGILGLLVIVLGFLPAPVPQGPKPPSRLQIAFLEARGRFGKQRMMIAGAGFIGGIILWLVTGWIVWIAIVPLAAVGVPWLLGNGGEQRKLDRLEGLETWTRGLAGLTVAGSSLEQTIIASVNSSPDSIRDEVALLAARLNARWPTRSALRKFADDLADPTGDLIVAHLLLAERVRGAGLANALEDLAQSIAEEVGVRRKIEADRAKPRQAIRITTIATVVLIGMMPFVSQFMAPYKTPLGQLILAVLITLDVVMLLWLKKITAGKPTPRILADLSDSKGAL*