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cn_combo_scaffold_731_12

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(11452..12258)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2PAH7_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 43.9
  • Coverage: 221.0
  • Bit_score: 188
  • Evalue 6.80e-45
Transcriptional regulator {ECO:0000313|EMBL:EHR53585.1}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XM similarity UNIPROT
DB: UniProtKB
  • Identity: 39.9
  • Coverage: 228.0
  • Bit_score: 175
  • Evalue 1.10e-40
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 42.2
  • Coverage: 223.0
  • Bit_score: 173
  • Evalue 6.40e-41

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Taxonomy

Saccharomonospora marina → Saccharomonospora → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 807
ATGGGTAGCCCAGAGATCGACTCCGGTGGCAGACGCGGCCGGCGACGGGCGAACCTCAGTCAGGACATCGCGTCGTCATTGCGGGACCTGATCATGTCCGGGGAGATCAACGTCGGGACCAGGCTGCGTGTCGAGCAGCTGGCCCGAGCGTTCGACGTCAGTCTGACCCCTGCGCGTGAGGCACTGATCGCCCTGCACGGGGAGGGCTTCCTCCGGCTCGAGGCGCGGCGGGGATACATCGTCGCAGCGTTGAGCAAGCGGGACCTCGAGGACATCTTCGACCTCCAGGCCTACATCGCCGGACGGCTCGCCGGGCGAGCGGCGCTAGCGCTCAGCGACGCCGAGCTCGACGAGCTCGACGCGTTGCAGCGGACGATCGAGGACGCGCACGAACGAGGTGACCATCAACTCATCGAGGAAACGAACTACCGACTGCACAAGATGATCAACAGCGTTGGTGAGTCCGACAAGCTGTCGTGGATGCTGCGCCTGCTCAACAGATACGTGCCGTACAGGTTCTACGGGAGCGTCGAGACGTGGCGCAATCCGGACCCGGACATTCATCGCTCCGTTCTCGCCGGTCTGCGAGATCGAAACCCGCGGCAGGCCGAGGAGCGGATGAGAGCACATATCGACGTGGCGGGCGTCGCGTTGATCGAGTATTTGCAGAGTCATGGCCATTTCGACGCGACCAACGAACACGACGGCCCGACGGACCCCGACGATCTCGCAGAGAAGATCGAGTCGGCGATGAGTCGGGATGCGGCGACTCCGCGGCTGGTACGTGCCGACCCGTTCAATTCATAG
PROTEIN sequence
Length: 269
MGSPEIDSGGRRGRRRANLSQDIASSLRDLIMSGEINVGTRLRVEQLARAFDVSLTPAREALIALHGEGFLRLEARRGYIVAALSKRDLEDIFDLQAYIAGRLAGRAALALSDAELDELDALQRTIEDAHERGDHQLIEETNYRLHKMINSVGESDKLSWMLRLLNRYVPYRFYGSVETWRNPDPDIHRSVLAGLRDRNPRQAEERMRAHIDVAGVALIEYLQSHGHFDATNEHDGPTDPDDLAEKIESAMSRDAATPRLVRADPFNS*