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cn_combo_scaffold_1735_6

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(7472..8191)

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFF3AA similarity UNIREF
DB: UNIREF100
  • Identity: 52.6
  • Coverage: 228.0
  • Bit_score: 226
  • Evalue 3.40e-56
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 49.8
  • Coverage: 243.0
  • Bit_score: 222
  • Evalue 1.40e-55
Regulatory protein TetR {ECO:0000313|EMBL:AEA26374.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st similarity UNIPROT
DB: UniProtKB
  • Identity: 49.8
  • Coverage: 243.0
  • Bit_score: 222
  • Evalue 6.90e-55

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 720
ATGGCACGCCAGTCCAGCGCCCGGACCGCCCCCGGACGGCGCGGCACCGCCCGCCGCGAGCTCGTCGAGGCGGAGATCCACGAGCACGCGGCGAAGTTGTTCGCCGAACGCGGGTTCGCCGGGACGAGCCTGCAGGACATCGCGGACTCGGTCGGCATCACGCGACAGGCGCTGTACTACTACGTCAAGAGCAAGGACGAGATGCTCGGGCGGCTCGTCGCCGACCTGACGAGCAGGCTCGTGGCGCAGATGCGCACGGTCAACGAGGAGCCGGGGCTCGACGCCGCGGAGCGGCTGTACCGGATCGCGCACCTGACCGCGACCGACCGGGCGGTCAACCGGACGCGCTTCCAGCTGCTCGACCGCTCGGCCTCCGCGCTGCCCGAGAGCCTGGCCGACGCCTACCTCGAGGGGCGCCGGGCGGCGCTCGCCGAGGTGCGGTCGGTGATCGACGACGGCATCGCGCAGGGACTGTTCCGGCCGGTGGACAGCCGCGTCGCGGCGCTGTCGGTGCTCGGCATGTGCAACTGGGTCGCCTGGTGGTTCGAGGCCGGCCCGGACCACCCGGTCGAGCCGATCGCGGCGCAGATCGCCGGCGGCGCCGTGGCCATGCTGCGGCTTCCCGACGACTCGGCGGGCGCCGATCCGCGGGCGGCGCTGGCGGCCGCGCGCGCCAGCCTCGACCTGCTCGAACGCCACCTCCCGGCCGCCCGGGACTGA
PROTEIN sequence
Length: 240
MARQSSARTAPGRRGTARRELVEAEIHEHAAKLFAERGFAGTSLQDIADSVGITRQALYYYVKSKDEMLGRLVADLTSRLVAQMRTVNEEPGLDAAERLYRIAHLTATDRAVNRTRFQLLDRSASALPESLADAYLEGRRAALAEVRSVIDDGIAQGLFRPVDSRVAALSVLGMCNWVAWWFEAGPDHPVEPIAAQIAGGAVAMLRLPDDSAGADPRAALAAARASLDLLERHLPAARD*