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cn_combo_scaffold_2819_6

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(5343..6092)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI0003782203 similarity UNIREF
DB: UNIREF100
  • Identity: 35.6
  • Coverage: 247.0
  • Bit_score: 111
  • Evalue 1.70e-21
IclR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 37.5
  • Coverage: 251.0
  • Bit_score: 111
  • Evalue 3.60e-22
Transcriptional regulator, IclR family {ECO:0000313|EMBL:KID31353.1}; TaxID=1515610 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Prauserella.;" source="Prauserella sp. Am3 similarity UNIPROT
DB: UniProtKB
  • Identity: 36.1
  • Coverage: 244.0
  • Bit_score: 111
  • Evalue 1.80e-21

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Taxonomy

Prauserella sp. Am3 → Prauserella → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 750
GTGAGTGCTTCGGTGGGCAAGGCCGCCGTGATCCTGCGGGCGTTCCGTCCGACCGTCGAGGTGCTCTCGGTCCGCGGCCTCGCCGAACGCACCGGCCTCCCCCGCTCGACCGTGCACCTGCTGTGCCGCACCCTCTGCGACAACGGCCTCCTGGAGACCGTCCCCCGCGGCGGCTACCGGCTCGGCCCGCTGCTGCTGGAGCTGGGCGGGCTCGTCATCGAGCGGACCGGGCTCGTGGAGGCCGTCGAGGGGTCGACCGCGGCGCTGCGCCGCGTCCCCGGCCAGGAGCTGCACGTCGGGCAGCTCGTCGAGGGCTGGGTCGTCTACCTGCACCGCGAGTCCGGCCCGACGCGCGTGACGATGACCAACCGCGTCGGTATGCGGGCGCCGGCCTTCCTGTCGGGCTGCGGCAAGAGCGCGCTGGCCGCACTCGATCCTGTCGACGCCGACCAGCGCGTCCGACGTCTGTGCCGCGACGAGGACCTGCCGCTGCCCGACATGGCCGCGCTCGACGACGAGTTCGCTGCCGCCCGCTCGGCCGGCTACCTGGTGTGCCGGTCGTTCCAGCCGGGCCGGACGTCGGTAGCGGCGCCGGTCGTGGGCCCCGACGGCCAGCCCGCCGGCGCCCTCTCCGTCGCCGGCCCCAACTCGACGTTCCCACCCGCGCGCCTCGCCGACCTGGGCCGTTGCGTCGGCGAGGCTGCGGGCGTGGCGAGCCGGCGCCTCGCCGGGCGCCTCCGGCGCTCGTGA
PROTEIN sequence
Length: 250
VSASVGKAAVILRAFRPTVEVLSVRGLAERTGLPRSTVHLLCRTLCDNGLLETVPRGGYRLGPLLLELGGLVIERTGLVEAVEGSTAALRRVPGQELHVGQLVEGWVVYLHRESGPTRVTMTNRVGMRAPAFLSGCGKSALAALDPVDADQRVRRLCRDEDLPLPDMAALDDEFAAARSAGYLVCRSFQPGRTSVAAPVVGPDGQPAGALSVAGPNSTFPPARLADLGRCVGEAAGVASRRLAGRLRRS*