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cn_combo_scaffold_3094_14

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(10088..12670)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LuxR family n=1 Tax=Rhodococcus sp. JVH1 RepID=J1R7M5_9NOCA similarity UNIREF
DB: UNIREF100
  • Identity: 52.8
  • Coverage: 886.0
  • Bit_score: 861
  • Evalue 5.70e-247
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:EJJ00184.1}; TaxID=745408 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. JVH1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.7
  • Coverage: 886.0
  • Bit_score: 860
  • Evalue 1.80e-246
LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 52.7
  • Coverage: 884.0
  • Bit_score: 854
  • Evalue 2.00e-245
  • rbh

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Taxonomy

Rhodococcus sp. JVH1 → Rhodococcus → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2583
TTGAACGCCGACGAGTGGAGCGAGATCCACCGGCTCCACGCCGAGGGGATGTCAGTCAAGGGCCTCGCCGCGCACCTCGGGATGTCGCGCAACACCGTCCGCCGGGCGCTGACGTTCGACGCGCCCCCGCCCGACCACCGCGCCCGCCGCGGATCGGCCGTCGACGCCTACGCCGACCGGATCCGGGTGCTGCTGTCGGAGGAGCCAGGCCTCACCATCGGCCAGATCGGCGAGCGGATCGGCTGGGACCGCTCGCGCACGACGCTGGCCACCCGCGTCAACAAGGAGCGGCGGATGCTCGCCGGCGGCCTCGGGCCGGCGCCCGTCGTCGGCGGGGCGGTGCCCGAGTTCGTCACCGAGTTCGTCGGCCGCCGCGCGGAGCTGCGCGAGCTGCGTGAGCTGCTGGGCAGCCACCGCGTCGTCACCGTGATCGGGGTGGGCGGCGTCGGCAAGACCCGGCTCGCGGTCCAGACGGCGGTCGAGCTGCGCCGCGGCTTCGCCGACGGGGTGCGCGTCGTCGAGCTCGCGTCGCTGCGCAACCCGGCGCTGCTGCCGCAGGCGGTGTTCGACGGTCTCGGCCTCGGCCACCGCGACCAGCCCGACCGATCGGCCGTCGACGCCCTCGTCGAGTACGTGCGCACCCGGCACCTGCTGATCGTGCTGGACAACTGCGAGCACGTCCTCGAGGCGGCCGCGCGGTTCGTCGACGACGTCCTGCACGCCACCTCGCGCGTGCACTTCCTCGCGACGAGCCGCGAGGTGCTGAACCTGCCGGGCGAGCGGATCACCGTGCTGCATCCGTTGTCCACCAAGGGCCCGGCCACCGACCTGTTCGAGAGCCGGGCCCGCGACGTCGTCCCCGGGTTCACTGTCGACGACAGCAACCGCGCCGCGGTGCAACGGGTCTGCGAGCGTCTCGACGGGCTGCCGCTGGCCATCGAGCTGGCCTGCGCGCGGCTGCGGGTGCTGTCCGTCCACGAGCTGGCCGACCGGCTCTCCGACGGCATCGACCTGCTCTCGACGCGCGTGCGCGCGGGCCCCGAGCGGCACCGCAACCTGCAGGCCGCCATGGCCTGGAGCCACGAGCTCTGCACCCGGGAGCAGCAGCTGCTGTGGGCGCGGGTGTCGGTGTTCGCCGGCGGGTTCGACACCCGTGCGGCCGAGGCCGTCTGCGCCGACGACGAGCTGCCCGTCGCGGAGGTGCTCGACTGTCTGTACGACCTCGTCGGCAAGTCGATCCTGCAGCGCGAGGAGTCGCGCGGCCGCGTCCGGTTCCGGGTGCTGGAGACGATCCGCGAGTTCGGGCAGGCGTTGCTGTCGCCCGAGGAGAGCGAGCGGCTGCACCGCCGCCACCTGGAGTGGTGCGCGGGCCTGGTCACCGAGTCGGTGCGGCGCTGGTTCTCCGACGACCAGTTCGCCATCTCCGAGCGCCTGCGCGCCAACCTCGCCAACGTCCGCACCGCGCTGGAGACGGCGCTGGAGTGGTCGCCCGACACGGCGGCCGAGCTGGTGTCGGCGCCCTGGTTCCTGTGGGCGTGCGGCCTCTCGGCGCGTGAGCACGCGATGTGGCTGGCCAGAGCGCTGGAGACGCCGGATCTCGTCCCCGAGCGCCGGGCCGCCGTGCTCGGCGCGCTCGGGCTCGTCCGCACCATGCAGGGCTATCAGGAGGCGGCCGACCCGATCGTCGCCGAGGCGCTCGCGCTGCATCCCGACGACCCGGTCGCCGTCGCGTTCGCGCTCGACGCGCAGGGCCTCGGCGCGTTCTTCTGCGGCGACCACCCCGAGGCCGAGCGGCTGCTCACCGAGTCGCTCGCCCGCTACGAGTCCGTCCGCGGCATCCGCGAGGACCTGCCCTGCGCGGTCCGGGTGCACCTCGGGATGCTGTGCTGCTTCGACGGGCGCACCGCGCAGGCCCAGGAGTTCTTCGACGACGTCCGCGCCCGCTGCGAGCAGGTCGGCGAACGCTGGATGCTGTCCTACGCCGTGTTCGGGCAGGGCCTGGTCGCCGTCACCGAGGAGCGCTACACCGACGCGATCGCGCTGGCCCGCGAGAGCCTCGGGCTCAAGCGGCACTTCGAGGACTCCGTCGGGACGCCGCTGGCCGTCGAGCTGCTGGGCTGGGCGGAGGCCGGCGCCGACTCCGCCGAGCGGTTCGCCGTCCTCATCGGAGCGTCGTCGGTGCTGTGGCGGGCGTTCGGCCAGCAGCTCTACGGCTCGGCACAGTGGATGGCCCGCCGCGAACGGTTCGCCACACGCGCCCGTTCCGGCCTGGGCAACGCCGCCTTCGAGTCCGCGATGCGCCGCGGCGCGGCGATGGGCGTGCCCGAGCTCCTCGACTTCGCCCTCAGCGACGGCGGCGGCACCGACCGGGAACCGGCCGACACGGGGGCGCTGGCCGTGCTCTCCCGGCGCGAACGCGAGGTCGCGCGGCACCTCGTCGCCGGGCGGACCAACCGGCAGATCGCGGAGGCCCTGGTGCTGTCGCACCGCACCGTCGAGGGCCACGTCGAGCACATCCTGCAGAAGCTGCGGCTCGACAACCGCAGCCAGGTCGCGGCGGCGCTGGTTTCGTCGCAGACCTGA
PROTEIN sequence
Length: 861
LNADEWSEIHRLHAEGMSVKGLAAHLGMSRNTVRRALTFDAPPPDHRARRGSAVDAYADRIRVLLSEEPGLTIGQIGERIGWDRSRTTLATRVNKERRMLAGGLGPAPVVGGAVPEFVTEFVGRRAELRELRELLGSHRVVTVIGVGGVGKTRLAVQTAVELRRGFADGVRVVELASLRNPALLPQAVFDGLGLGHRDQPDRSAVDALVEYVRTRHLLIVLDNCEHVLEAAARFVDDVLHATSRVHFLATSREVLNLPGERITVLHPLSTKGPATDLFESRARDVVPGFTVDDSNRAAVQRVCERLDGLPLAIELACARLRVLSVHELADRLSDGIDLLSTRVRAGPERHRNLQAAMAWSHELCTREQQLLWARVSVFAGGFDTRAAEAVCADDELPVAEVLDCLYDLVGKSILQREESRGRVRFRVLETIREFGQALLSPEESERLHRRHLEWCAGLVTESVRRWFSDDQFAISERLRANLANVRTALETALEWSPDTAAELVSAPWFLWACGLSAREHAMWLARALETPDLVPERRAAVLGALGLVRTMQGYQEAADPIVAEALALHPDDPVAVAFALDAQGLGAFFCGDHPEAERLLTESLARYESVRGIREDLPCAVRVHLGMLCCFDGRTAQAQEFFDDVRARCEQVGERWMLSYAVFGQGLVAVTEERYTDAIALARESLGLKRHFEDSVGTPLAVELLGWAEAGADSAERFAVLIGASSVLWRAFGQQLYGSAQWMARRERFATRARSGLGNAAFESAMRRGAAMGVPELLDFALSDGGGTDREPADTGALAVLSRREREVARHLVAGRTNRQIAEALVLSHRTVEGHVEHILQKLRLDNRSQVAAALVSSQT*