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cn_combo_scaffold_3094_24

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: 17562..18143

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI0003816BE4 similarity UNIREF
DB: UNIREF100
  • Identity: 44.8
  • Coverage: 181.0
  • Bit_score: 148
  • Evalue 5.60e-33
Transcriptional regulator, XRE family with cupin 2 sensor {ECO:0000313|EMBL:KHS52629.1}; TaxID=1703 species="Bacteria; Actinobacteria; Micrococcales; Brevibacteriaceae; Brevibacterium.;" source="Brevi similarity UNIPROT
DB: UniProtKB
  • Identity: 38.3
  • Coverage: 175.0
  • Bit_score: 120
  • Evalue 2.30e-24
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 35.0
  • Coverage: 180.0
  • Bit_score: 110
  • Evalue 4.80e-22

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Taxonomy

Brevibacterium linens → Brevibacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 582
GTGAATGCGAGCTTCGGAGCACGCCTGCGCCTGCGCCGGCACCAGGCACGACTGAGCCTCGAGTCCCTGGCGACGCTCAGCGGCGTGTCCCGGGCGACCCTGTCGAAGATCGAACGCGGCGAGCGGAACCCGAGCCTCTCGTCGGCAGCTCGCATCGCCGACGCGCTGCAGGTCCCACTGGCCACGATGCTGTCGGTCGCGGGTGCGTCGTCCGAGGTCCAGGTGGTGCGCGGCGATGGCGGCGTCAGCCTGGTCGACGACGAGACCGGCGCGATCCGCGAGTCGGTGCTGCCGGTCCTGGAGGGCGTGGAGATCGTGCGGTACACGCTCCCGCCGCACTGCTCGGCCGGCCCGTTCCACCCCCACTCGCCCGGCGCCAAAGAGGTCTTCATCGTCATGGACGGCGAGATCGAGGTGCGTTCGGGAACGCACCGGATCGACCTGCAGTCCGGCGACGTGGCGATGGTCCCCGGCGACCTGAGCCACCAGCTGACCAACAACGGCGACGTGCCGACGAAGGTGATGCTGGTGCTGGTCAGGCCCGGTGTGCCCGATGTGGACGCACTCTCGGAAGAGAAGTGA
PROTEIN sequence
Length: 194
VNASFGARLRLRRHQARLSLESLATLSGVSRATLSKIERGERNPSLSSAARIADALQVPLATMLSVAGASSEVQVVRGDGGVSLVDDETGAIRESVLPVLEGVEIVRYTLPPHCSAGPFHPHSPGAKEVFIVMDGEIEVRSGTHRIDLQSGDVAMVPGDLSHQLTNNGDVPTKVMLVLVRPGVPDVDALSEEK*