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cn_combo_scaffold_7239_3

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: 1547..2599

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002628CC1 similarity UNIREF
DB: UNIREF100
  • Identity: 62.0
  • Coverage: 313.0
  • Bit_score: 398
  • Evalue 9.60e-108
Transcriptional regulator {ECO:0000313|EMBL:EHR50730.1}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XM similarity UNIPROT
DB: UniProtKB
  • Identity: 62.3
  • Coverage: 310.0
  • Bit_score: 395
  • Evalue 6.70e-107
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 61.3
  • Coverage: 313.0
  • Bit_score: 394
  • Evalue 3.00e-107
  • rbh

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Taxonomy

Saccharomonospora marina → Saccharomonospora → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1053
ATGCCCCGGCTCCCGCGCCTAAGCTCGCGTCGGTACCGGACGACGACGCTGGGGGTGACCGGCGTGAGCCGACGAAGCGTCGCCTCGCTCGCCAACATCGACCTGAACCTGCTGGTCGTGCTGCGCGAGCTGCTGCGGGAGCAGAACGTCACCCGTGCCGCCGAACGGGTCGGGGTCACCCAGCCCGCCGCGAGCGCCGCGCTGGCCCGGCTGCGCCGCCACTTCGACGACGACCTGCTGGAGCGCAACCGCAACGGCTACCTCCTGACGCCGCTGGGCCAGCAGCTGGCGGCGCAGGTCGAGCCCCTCGCCCTCGGGCTGGAACGGCTCTTCTCCCCCGACCCGGCGTTCCGCCCCGAGGCGTCCGACCGCGAGTTCGTGCTGATGACCACCGACTACGTGCTCGCCGTCATCGGCGAGGACCTGTCGCGGGCGATGTACGCGGCGTCGCCGTCGATCCGGCTCTACGTCGACGTCGTGAAGGGGTCGCTGCCGGCCGACCTGCCCGACACGCTGCGCCGCGTCGACGCCATCGTCTCGGCGCCGAAAGCCGAGTTCAAGGCGTCGGAACTGCGCGGGACGGAATTGTTCCGGGACCGCTGGGTATGCGTCATCGATGCCGAAAACGACATTTCCGACGCAATCACCGTCGACGACCTCGAACGAATGTCGTGGGTCGTTCCCAACCATCCCGACGGTGAGTACCCCGCAAGCTCCCCGCTGGGCCCGGTGCTGGCCGGGCTGCGCCGCCGGCCGTCCGTCGCGGTGCGCGTCGACAGCTACCACGTGACGCCGTGGTTCGTGGCCGGCACCGACCGTGTCGCCGTCATGCAACAGCGCCTGGCCAGGCAGTTCGCCGACCGTCCCGACCTGCGGACCCTCGACTGCCCCGTCGATGTCCCGCCGCTCACCGAGATCCTGTGGTGGCACCAGCGCAACGACGACGACCCCGGCCACCGCTGGCTCCGGACCCTGCTCCGTCACGTGTCGGCACCCCTGCGGCCCGATTCCGATCCCATACACAGCGGTGATGCCGAGCATTCCGACTCGTGA
PROTEIN sequence
Length: 351
MPRLPRLSSRRYRTTTLGVTGVSRRSVASLANIDLNLLVVLRELLREQNVTRAAERVGVTQPAASAALARLRRHFDDDLLERNRNGYLLTPLGQQLAAQVEPLALGLERLFSPDPAFRPEASDREFVLMTTDYVLAVIGEDLSRAMYAASPSIRLYVDVVKGSLPADLPDTLRRVDAIVSAPKAEFKASELRGTELFRDRWVCVIDAENDISDAITVDDLERMSWVVPNHPDGEYPASSPLGPVLAGLRRRPSVAVRVDSYHVTPWFVAGTDRVAVMQQRLARQFADRPDLRTLDCPVDVPPLTEILWWHQRNDDDPGHRWLRTLLRHVSAPLRPDSDPIHSGDAEHSDS*