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cn_combo_scaffold_7239_6

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(4845..6293)

Top 3 Functional Annotations

Value Algorithm Source
PAS domain S-box n=1 Tax=Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101) RepID=C7MRK1_SACVD similarity UNIREF
DB: UNIREF100
  • Identity: 57.4
  • Coverage: 495.0
  • Bit_score: 527
  • Evalue 1.10e-146
PAS domain S-box similarity KEGG
DB: KEGG
  • Identity: 57.4
  • Coverage: 495.0
  • Bit_score: 527
  • Evalue 3.10e-147
  • rbh
PAS domain S-box {ECO:0000313|EMBL:ACU98787.1}; TaxID=471857 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora viridis (strain AT similarity UNIPROT
DB: UniProtKB
  • Identity: 57.4
  • Coverage: 495.0
  • Bit_score: 527
  • Evalue 1.50e-146

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Taxonomy

Saccharomonospora viridis → Saccharomonospora → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1449
GTGACGGGACGGGAGCAGGATGCGAGTGCACTCGTCGACGTCTCCGCCGACGGCCTCGCCGTCCTCGACGCCCACGGCCGGTTCACGTTCCTCAACGCCGCGGCGGCCCACCTGCTGGGTGCCGCCGGCCTCGTCGGGGCTCCGGGACCGTTCCCGGTCACCTCCGGCGAGGCCATCGTCGCGTGGACGCCGCCCGGGGGCCGGGCCCGCGAGCTCGAGTACCGCGTGGCCGCGTCCGGGAACGGGCACGTCGTCTGGTTCCGCGACGTCACCGACGTCGCCCACCAGCAGGAACGCCTCACCGCCATCGCCCGCGTCGCCGCGGGCGTCACCGAGTCCGCCTCGCTGTCGCAGACGCTGGAGGCCGTCGCCCGCGAGATCGTCGCCACCGCCAACATCGCCGCCGTCCAGATCCTCACCATCGACGACCCCAACGCCGACCTGCGCATCCTCGGCATGGCGGGCTTCGGCGTGGCACCCGACTTCGTCGAACGGTTCGCCCGGTGCCGCGCCCTCGGCGCCGACGTCCGTTTCCTCGACGCCTTCGCCGCCGGCACACGCGTCGTCGTCCCTCACCGCAAGGCCGTGATCATGGCCGACCCGCTCTGGGCGCCGTTGCACGAGATCATGGACCGCCCCGACTGGGACGGATTCGTCGCCATGCCGATGATCGTCCGTGGCCGCACCCTCGGCGTCGTCAACGCCTACTTCGTGCCCGGGGAGGAACCCGGCCCGCTCGCCTTCCTCGAAGCGATGGCCGACCACGCCGCGATCGCCGTCGACACCGCCGGGCTGCTCGCCCAGACCCGCACCCGCGCCCGGTCCGACGAACGCCGCCGACTCGCCCGCGACCTGCACGACTCCGTCGTCCAGCAGCTGTTCTCCATGCGCATGCAGGCCCGTGTCCTGCGCAACCAGCTCGACCGCGACCCGGGAGGCGGCGACCCCGCCCGGCTGCGCATCGCCGCTGAGGAGCTCGCCTCCCTCTCGTCGACCGCGCTCGCCGACCTGCGCCAGCTCGTCTTCGAGCTCCGGCCGCTGGAGCTGGAGGAACGCGGCCTCGTCGAGGCCATCCGCGGCCAGGCTGCAGGCGTCCAGGCCCGCACCGGGCTCACCGTCGACGTCCACGCCGACCGGGACCGCATCGAGGGCGACCTCGACCTGCAGGAGGATGTGTACCGGATCGTCTCGGAGGCGGTGCACAACGTGGTGAAGCACGCGGGAGCGGCGACGGCGGAGATCGGCATCGCTGTCGACGACGGGGACCTCGTCGTCGAGGTCGCCGACGACGGCGCCGGCACCGGCTCCGGTGGGAGCGGCGGCCTCGGGCTGGTGTCGATGCGCGAACGCGCCGAACGCTGGGGTGGCCGTTTCGCCGCGGGTCCCCGCCCCGGCGGCGGCTGGACCGTGCGGGTCGCCGTGCCGCTGCCCGGACAGGCGGCGTCGTGA
PROTEIN sequence
Length: 483
VTGREQDASALVDVSADGLAVLDAHGRFTFLNAAAAHLLGAAGLVGAPGPFPVTSGEAIVAWTPPGGRARELEYRVAASGNGHVVWFRDVTDVAHQQERLTAIARVAAGVTESASLSQTLEAVAREIVATANIAAVQILTIDDPNADLRILGMAGFGVAPDFVERFARCRALGADVRFLDAFAAGTRVVVPHRKAVIMADPLWAPLHEIMDRPDWDGFVAMPMIVRGRTLGVVNAYFVPGEEPGPLAFLEAMADHAAIAVDTAGLLAQTRTRARSDERRRLARDLHDSVVQQLFSMRMQARVLRNQLDRDPGGGDPARLRIAAEELASLSSTALADLRQLVFELRPLELEERGLVEAIRGQAAGVQARTGLTVDVHADRDRIEGDLDLQEDVYRIVSEAVHNVVKHAGAATAEIGIAVDDGDLVVEVADDGAGTGSGGSGGLGLVSMRERAERWGGRFAAGPRPGGGWTVRVAVPLPGQAAS*